BLASTX nr result

ID: Coptis25_contig00012215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012215
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246...    97   3e-18
ref|XP_002522252.1| conserved hypothetical protein [Ricinus comm...    89   1e-15
ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|2...    84   4e-14
ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
ref|XP_003629833.1| hypothetical protein MTR_8g087390 [Medicago ...    79   8e-13

>ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246308 [Vitis vinifera]
           gi|147781893|emb|CAN69942.1| hypothetical protein
           VITISV_006130 [Vitis vinifera]
          Length = 97

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = +3

Query: 105 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVD-DKLKVPSLKDSLVLSSLAKGKVPP 281
           MA      L+ ++  S F + S+D RKLL ME+   +K  +P+L+ SLVL++L KG VP 
Sbjct: 1   MASHKALLLILFVVFSSF-LPSLDARKLLDMEEDSHNKKSIPALEASLVLAALPKGTVPA 59

Query: 282 SAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 395
           S+PS  GHA+++D+KL  RH A +DRILRSVPSPGVGH
Sbjct: 60  SSPSKKGHAMVVDEKLIARHLAVVDRILRSVPSPGVGH 97


>ref|XP_002522252.1| conserved hypothetical protein [Ricinus communis]
           gi|223538505|gb|EEF40110.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
 Frame = +3

Query: 105 MARSYFTFLVFYLALSVFFIQSIDGRKLLGM----EKVDDKLKVPSLKDSLVLSSLAKGK 272
           MARS    L+F LA + F + +I GRKLL M    E       VPS+  SLV S+L K  
Sbjct: 1   MARSIALALIFLLAFTTF-VSNIQGRKLLMMTSDAEGTSSTSTVPSMFASLVFSALPKST 59

Query: 273 VPPSAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 395
           V  S+PS  GHA + +++LF RH AS+DRIL+SVPSPGVGH
Sbjct: 60  VRSSSPSRKGHATLDNEELFRRHLASIDRILQSVPSPGVGH 100


>ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|222848691|gb|EEE86238.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
 Frame = +3

Query: 105 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVDDKLKVPSLKD---------SLVLSS 257
           MAR     L+F ++ +   + +I+GRKLL       +    S K+         SLVLS+
Sbjct: 1   MARFGAVVLIFLVSFATI-VSNIEGRKLLMSTGTPQENSSSSNKEGTSSVSSFASLVLSA 59

Query: 258 LAKGKVPPSAPSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 395
           L KG VP S+PS  GHA + +++LF RH AS+DRILRSVPSPGVGH
Sbjct: 60  LPKGTVPSSSPSKKGHATLDNEQLFARHLASIDRILRSVPSPGVGH 105


>ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|222860459|gb|EEE98006.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
 Frame = +3

Query: 105 MARSYFTFLVFYLALSVFFIQSIDGRKLLGMEKVD-------DKLKVPSLKDSLVLSSLA 263
           MAR      +F+ + + F + +I+GRKLL             DK  V S   SLVLS+L 
Sbjct: 1   MARFGAVVFIFFFSFAAF-MSNIEGRKLLMSTSAQESNSNSWDKRSVSSFA-SLVLSALP 58

Query: 264 KGKVPPSA-PSNHGHAVIIDQKLFVRHFASLDRILRSVPSPGVGH 395
           KGKVP S+ PS  GHA + ++++F RH AS+DRILRSVPSPGVG+
Sbjct: 59  KGKVPSSSSPSKKGHATLDNEQIFARHLASIDRILRSVPSPGVGN 103


>ref|XP_003629833.1| hypothetical protein MTR_8g087390 [Medicago truncatula]
           gi|355523855|gb|AET04309.1| hypothetical protein
           MTR_8g087390 [Medicago truncatula]
          Length = 100

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
 Frame = +3

Query: 126 FLVFYLALSVFFIQSIDGRKL-LGMEKVDDKLKV--PSLKDSLVLSSLAKGKVPPSAPSN 296
           FL+ +L L       ++GRKL +G EK   K+ +   S +D L  S+L KG VP S+P+ 
Sbjct: 7   FLIIFLVLFSSLCLCLEGRKLVMGAEKQWKKMNMMKQSSRDGLFRSALPKGTVPSSSPTK 66

Query: 297 HGHAVIIDQKLFVRHFASLDRIL-RSVPSPGVGH 395
            GHAV++D+KL  RH  S+DR+L  SVPSPG+GH
Sbjct: 67  KGHAVVVDEKLIERHLISMDRVLIVSVPSPGIGH 100


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