BLASTX nr result

ID: Coptis25_contig00012213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012213
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003575542.1| PREDICTED: uncharacterized protein LOC100842...   130   1e-27
emb|CBI39537.3| unnamed protein product [Vitis vinifera]              114   7e-23
ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244...   114   7e-23
ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-21
ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811...   106   1e-20

>ref|XP_003575542.1| PREDICTED: uncharacterized protein LOC100842365 [Brachypodium
            distachyon]
          Length = 141

 Score =  130 bits (326), Expect = 1e-27
 Identities = 70/119 (58%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
 Frame = +3

Query: 705  LYIHI*GAYGTCFLSLDWLFDIGAVVCNVVTKCWFGWMSFLDLAFIGY--GRCI*KKQDG 878
            +Y H+ G Y +C+L L WLFDIGA +   VT  W G +  L   F     G  I KK+  
Sbjct: 23   IYFHMRGPYISCYLFLGWLFDIGAGIRERVTTWWIGLLVVLIGWFCSLQCGSFIQKKESE 82

Query: 879  RSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLNASYD 1055
            RSS PVQLSKFL R+KD+  +RS +SGKKIM+KL+KSKEDK AE+KRNELLKFLNASYD
Sbjct: 83   RSSGPVQLSKFLAREKDEGGKRSVISGKKIMMKLEKSKEDKAAESKRNELLKFLNASYD 141


>emb|CBI39537.3| unnamed protein product [Vitis vinifera]
          Length = 769

 Score =  114 bits (284), Expect = 7e-23
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +3

Query: 864  KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 1043
            K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN
Sbjct: 706  KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 765

Query: 1044 ASYD 1055
            ASYD
Sbjct: 766  ASYD 769


>ref|XP_002283474.1| PREDICTED: uncharacterized protein LOC100244276 [Vitis vinifera]
          Length = 171

 Score =  114 bits (284), Expect = 7e-23
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +3

Query: 864  KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 1043
            K+QD RSSSPVQLSKFLGR KDD VRRSAVSGKKI+LKLDKSKEDK AENKRNELLKFLN
Sbjct: 108  KEQDERSSSPVQLSKFLGRGKDDSVRRSAVSGKKILLKLDKSKEDKAAENKRNELLKFLN 167

Query: 1044 ASYD 1055
            ASYD
Sbjct: 168  ASYD 171


>ref|XP_002330220.1| predicted protein [Populus trichocarpa] gi|222871676|gb|EEF08807.1|
            predicted protein [Populus trichocarpa]
          Length = 88

 Score =  108 bits (269), Expect = 4e-21
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 864  KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 1043
            K+QD R+SSPVQLSKFLGRDK+D VRRSAVSGKKI+LKL+KSKEDK AENKRNELLKFLN
Sbjct: 25   KEQDERNSSPVQLSKFLGRDKEDGVRRSAVSGKKILLKLEKSKEDKAAENKRNELLKFLN 84

Query: 1044 ASYD 1055
            AS D
Sbjct: 85   ASCD 88


>ref|XP_003554632.1| PREDICTED: uncharacterized protein LOC100811105 [Glycine max]
          Length = 183

 Score =  106 bits (265), Expect = 1e-20
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = +3

Query: 864  KKQDGRSSSPVQLSKFLGRDKDDKVRRSAVSGKKIMLKLDKSKEDKMAENKRNELLKFLN 1043
            K+ D RSSSPVQLSKFLGRDKDD VRRSAVSGKKI+LKL+K+KEDK+AE+KRNELL FLN
Sbjct: 120  KQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLN 179

Query: 1044 ASYD 1055
            AS+D
Sbjct: 180  ASFD 183


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