BLASTX nr result

ID: Coptis25_contig00012212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012212
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis ly...   372   e-100
emb|CBI31533.3| unnamed protein product [Vitis vinifera]              372   e-100
ref|XP_002279488.2| PREDICTED: mitochondrial substrate carrier f...   371   e-100
gb|AAM65850.1| putative peroxisomal membrane carrier protein [Ar...   371   e-100

>ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|222864215|gb|EEF01346.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  374 bits (960), Expect = e-101
 Identities = 191/267 (71%), Positives = 221/267 (82%), Gaps = 2/267 (0%)
 Frame = +1

Query: 1   VGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNP 180
           VGTA SQGVYYYFYQIFRD+AEA AR   + G GDG+VGM SSL+VAA++GC NVLLTNP
Sbjct: 72  VGTACSQGVYYYFYQIFRDRAEAIARENKRNGIGDGSVGMLSSLMVAALAGCTNVLLTNP 131

Query: 181 IWVVVTRMQTHKKGLIEDKPTHNISSDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWK 360
           IWVVVTRMQTH K   + +P H+  + D   +  IE PPYGT +A+QE+Y EAGI+GFWK
Sbjct: 132 IWVVVTRMQTHTKNSNKSQPGHSSIAPDEKALDPIECPPYGTGHAIQELYDEAGIQGFWK 191

Query: 361 GVFPTLIMVSNPSIQFMLYETXXXXXXARRA--EKGNTGVTALEVFLLGAVAKLGATVMT 534
           GVFPTLIMVSNPS+QFMLYET       +RA  ++G+TGVTALE+FLLGA+AKLGATV+T
Sbjct: 192 GVFPTLIMVSNPSMQFMLYETMLKKLKRKRALVKQGDTGVTALEIFLLGALAKLGATVVT 251

Query: 535 YPLLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAV 714
           YPLLVVKSRLQAKQ T GDK+H Y+GTLDAILKMIRYEGL+GFYKGMSTKIVQSVLAAAV
Sbjct: 252 YPLLVVKSRLQAKQTTTGDKRHNYEGTLDAILKMIRYEGLHGFYKGMSTKIVQSVLAAAV 311

Query: 715 LFMIKEELVKWARLLLTSNVVSINKVK 795
           LFMIKEELV+ AR+LLT    S  + +
Sbjct: 312 LFMIKEELVRGARMLLTKGGASTARTR 338


>ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327526|gb|EFH57946.1| peroxisomal membrane protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score =  372 bits (954), Expect = e-100
 Identities = 190/256 (74%), Positives = 219/256 (85%), Gaps = 1/256 (0%)
 Frame = +1

Query: 4   GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 183
           GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA +G VNVL+TNPI
Sbjct: 73  GTAASQGVYYYFYQVFRNQAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPI 132

Query: 184 WVVVTRMQTHKKGLIEDKPTHNIS-SDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWK 360
           WV+VTRMQTH+K + +D+   ++S S D+  +  +EP PYGT N +QEVY EAG+ GFWK
Sbjct: 133 WVIVTRMQTHRK-MTKDQTAASVSPSSDAEALVTVEPRPYGTFNTIQEVYDEAGVTGFWK 191

Query: 361 GVFPTLIMVSNPSIQFMLYETXXXXXXARRAEKGNTGVTALEVFLLGAVAKLGATVMTYP 540
           GV PTLIMVSNP++QFMLYET       +RA KG+  VTALE FLLGAVAKLGATV TYP
Sbjct: 192 GVIPTLIMVSNPAMQFMLYETMLTKLKKKRALKGSNSVTALETFLLGAVAKLGATVTTYP 251

Query: 541 LLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLF 720
           LLVVKSRLQAKQVT GDK+HQYKGTLDAILKMI+YEGLYGFYKGMSTKIVQSVLAAAVLF
Sbjct: 252 LLVVKSRLQAKQVTTGDKRHQYKGTLDAILKMIQYEGLYGFYKGMSTKIVQSVLAAAVLF 311

Query: 721 MIKEELVKWARLLLTS 768
           MIKEELVK A+LLL++
Sbjct: 312 MIKEELVKGAKLLLSN 327


>emb|CBI31533.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  372 bits (954), Expect = e-100
 Identities = 191/263 (72%), Positives = 221/263 (84%), Gaps = 3/263 (1%)
 Frame = +1

Query: 1   VGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNP 180
           VGTAASQGVYYYFYQIFR+KAEA+A  R+K G GDG+VGMFSSLVVAA+SGCVNVLLTNP
Sbjct: 72  VGTAASQGVYYYFYQIFRNKAEASALERMKNGIGDGSVGMFSSLVVAALSGCVNVLLTNP 131

Query: 181 IWVVVTRMQTHKKGLIEDKPTHNIS-SDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFW 357
           IWV+VTRMQTH K   + KP ++ + + +   ++AIEP PYGT++A+QEVYGEAG+RGFW
Sbjct: 132 IWVIVTRMQTHTKISKQSKPIYSPAVAANEAAVSAIEPTPYGTSHAIQEVYGEAGVRGFW 191

Query: 358 KGVFPTLIMVSNPSIQFMLYETXXXXXXARRA--EKGNTGVTALEVFLLGAVAKLGATVM 531
           KGV PTLIMVSNPSIQFMLYET       RRA  +K + G+TA E+FLLGA+AKLGATV+
Sbjct: 192 KGVLPTLIMVSNPSIQFMLYETMLKKLRKRRASQKKDSGGITASEIFLLGALAKLGATVV 251

Query: 532 TYPLLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAA 711
           TYPLLVVKSRLQAKQV GGDK+H YKGT DAI KMI YEG  GFYKGM+TKIVQSVLAAA
Sbjct: 252 TYPLLVVKSRLQAKQVAGGDKRHHYKGTCDAIGKMIHYEGFAGFYKGMNTKIVQSVLAAA 311

Query: 712 VLFMIKEELVKWARLLLTSNVVS 780
           VLFM+KEELV+  RLLL+  V +
Sbjct: 312 VLFMVKEELVRGVRLLLSKKVTN 334


>ref|XP_002279488.2| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis
           vinifera]
          Length = 342

 Score =  371 bits (953), Expect = e-100
 Identities = 191/261 (73%), Positives = 220/261 (84%), Gaps = 3/261 (1%)
 Frame = +1

Query: 1   VGTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNP 180
           VGTAASQGVYYYFYQIFR+KAEA+A  R+K G GDG+VGMFSSLVVAA+SGCVNVLLTNP
Sbjct: 72  VGTAASQGVYYYFYQIFRNKAEASALERMKNGIGDGSVGMFSSLVVAALSGCVNVLLTNP 131

Query: 181 IWVVVTRMQTHKKGLIEDKPTHNIS-SDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFW 357
           IWV+VTRMQTH K   + KP ++ + + +   ++AIEP PYGT++A+QEVYGEAG+RGFW
Sbjct: 132 IWVIVTRMQTHTKISKQSKPIYSPAVAANEAAVSAIEPTPYGTSHAIQEVYGEAGVRGFW 191

Query: 358 KGVFPTLIMVSNPSIQFMLYETXXXXXXARRA--EKGNTGVTALEVFLLGAVAKLGATVM 531
           KGV PTLIMVSNPSIQFMLYET       RRA  +K + G+TA E+FLLGA+AKLGATV+
Sbjct: 192 KGVLPTLIMVSNPSIQFMLYETMLKKLRKRRASQKKDSGGITASEIFLLGALAKLGATVV 251

Query: 532 TYPLLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAA 711
           TYPLLVVKSRLQAKQV GGDK+H YKGT DAI KMI YEG  GFYKGM+TKIVQSVLAAA
Sbjct: 252 TYPLLVVKSRLQAKQVAGGDKRHHYKGTCDAIGKMIHYEGFAGFYKGMNTKIVQSVLAAA 311

Query: 712 VLFMIKEELVKWARLLLTSNV 774
           VLFM+KEELV+  RLLL+  V
Sbjct: 312 VLFMVKEELVRGVRLLLSKKV 332


>gb|AAM65850.1| putative peroxisomal membrane carrier protein [Arabidopsis
           thaliana]
          Length = 331

 Score =  371 bits (952), Expect = e-100
 Identities = 193/260 (74%), Positives = 215/260 (82%)
 Frame = +1

Query: 4   GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 183
           GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA +G VNVL+TNPI
Sbjct: 73  GTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPI 132

Query: 184 WVVVTRMQTHKKGLIEDKPTHNISSDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWKG 363
           WV+VTRMQTH+K   +        S ++  + A+EP PYGT N ++EVY EAGI GFWKG
Sbjct: 133 WVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREVYDEAGITGFWKG 192

Query: 364 VFPTLIMVSNPSIQFMLYETXXXXXXARRAEKGNTGVTALEVFLLGAVAKLGATVMTYPL 543
           V PTLIMVSNPS+QFMLYET       +RA KG+  VTALE FLLGAVAKLGATV TYPL
Sbjct: 193 VIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAVAKLGATVTTYPL 252

Query: 544 LVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 723
           LVVKSRLQAKQVT GDK+ QYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM
Sbjct: 253 LVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 312

Query: 724 IKEELVKWARLLLTSNVVSI 783
           IKEELVK A+LLL SN  SI
Sbjct: 313 IKEELVKGAKLLL-SNATSI 331


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