BLASTX nr result

ID: Coptis25_contig00012210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012210
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20096.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809...    72   5e-11
ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002311852.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>emb|CBI20096.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
 Frame = -2

Query: 290 IMSEAYDWLVGQSPEHWANSKFPGKRYN-LLTLDVECYNTWLLEARNMPIAGSVDKIRTK 114
           +  E YDW+V   PEHWANS FPG+R++ + T  VE +N ++ E R++P+ G +   R K
Sbjct: 518 LKEELYDWVVSTGPEHWANSLFPGRRWDKIFTSQVESFNRFVQEERDLPVVGFITAHRLK 577

Query: 113 MMDLLNKRREEV--WKCPVGDSVDVNLKKN 30
           + +LL +++ EV  W+ PVG  +++ +K+N
Sbjct: 578 LSELLLRKQSEVAKWETPVGGKIEMKIKEN 607


>ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809446 [Glycine max]
          Length = 748

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = -2

Query: 290 IMSEAYDWLVGQSPEHWANSKFPGKRYNLLTLDV-ECYNTWLLEARNMPIAGSVDKIRTK 114
           I  EAYDW++   PEHWAN+ F G RYNLL+ +  + + +W+ EA  +PI   +D +R K
Sbjct: 512 ISPEAYDWVIQSEPEHWANAFFNGARYNLLSSNFGQQFYSWVSEAHELPITQMIDALRGK 571

Query: 113 MMDLLNKRREE--VWKCPVGDSVDVNLKKNIVLSERLE 6
           MM+ +  RR E   W   +  S +  L+K  +++  L+
Sbjct: 572 MMETIYTRRVESNQWMTKLTPSKEELLQKETLVAPSLQ 609


>ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|222861034|gb|EEE98576.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = -2

Query: 290 IMSEAYDWLVGQSPEHWANSKFPGKRYNLLTLDV-ECYNTWLLEARNMPIAGSVDKIRTK 114
           I  EAYDW++   PE+WANS F G RYN +T  + E + +WL E   +PI   ++ IR K
Sbjct: 340 ISPEAYDWILQSDPENWANSLFHGARYNHITSGIAESFYSWLTELAALPIIKIIETIRHK 399

Query: 113 MMDLLNKRREE--VWKCPVGDSVDVNLKKNIVLSERLE 6
           +M+L+  R+ E   W   +  SV+  L+K I+ ++ L+
Sbjct: 400 LMELIYTRKVESDQWLTRLTPSVEDKLQKEILKAQSLQ 437


>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = -2

Query: 290 IMSEAYDWLVGQSPEHWANSKFPGKRYNLLTLDV-ECYNTWLLEARNMPIAGSVDKIRTK 114
           I  EAY+W++   P HWANS F G RYN +T  + E + +WL E   +P+   +D IR K
Sbjct: 340 ISPEAYEWILQSEPVHWANSFFEGARYNHITSGIAESFYSWLTELTALPVTKIIDTIRHK 399

Query: 113 MMDLLNKRR--EEVWKCPVGDSVDVNLKKNIVLSERLE 6
           +M+L+  R+   + W   +  SV+  L+K I+ ++ L+
Sbjct: 400 LMELIYTRKVDSDQWITRLTPSVEDKLQKEILKAQSLQ 437


>ref|XP_002311852.1| predicted protein [Populus trichocarpa] gi|222851672|gb|EEE89219.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
 Frame = -2

Query: 290 IMSEAYDWLVGQSPEHWANSKFPGKRYNLLTLDV-ECYNTWLLEARNMPIAGSVDKIRTK 114
           I  EAY+W+V   PEHWAN+ F G RY+ +T +  + +  W+ EA  +PI   VD +R K
Sbjct: 27  ISPEAYNWVVQSEPEHWANAFFGGARYDHMTSNFGQQFYNWISEAHELPITQMVDALRGK 86

Query: 113 MMDLLNKRREE--VWKCPVGDSVDVNLKKNIVLSERLE 6
           MM+ +  RR E   WK  +  S +  L+K + ++  L+
Sbjct: 87  MMEAIYTRRVESNQWKTKLTPSKEEKLEKEMSIARSLQ 124


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