BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012191
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594396.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07
ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|35548...    59   5e-07
ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|35548...    56   3e-06
ref|XP_003594085.1| F-box family protein, partial [Medicago trun...    55   8e-06
ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|35548...    55   8e-06

>ref|XP_003594396.1| F-box protein [Medicago truncatula] gi|355483444|gb|AES64647.1|
           F-box protein [Medicago truncatula]
          Length = 439

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
 Frame = -1

Query: 246 ESFREVPCPDHL----ICNSCNSSVATLDGNLCV-VSYDEAFFELWVMKEYGASESWFKQ 82
           E+F EVP PD L      NS    VA L G LC+ V Y     ++WVMKEYG+ +SW K 
Sbjct: 255 ETFNEVPLPDELGEEVNSNSFEIRVAVLGGCLCMTVDYKTTNVDIWVMKEYGSRDSWCKL 314

Query: 81  F-IIRHELGLTC-FLEPLCFINKG 16
           F +++  LGL    L PLC+   G
Sbjct: 315 FTLVKSSLGLPLESLRPLCYSRDG 338


>ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|355483439|gb|AES64642.1|
           F-box protein [Medicago truncatula]
          Length = 388

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = -1

Query: 246 ESFREVPCPDHLICN-SCNSSVATLDGNLCV-VSYDEAFFELWVMKEYGASESWFKQFII 73
           E F EVP PD +I N S   S+A L G LC+ V+Y     ++WVMKEYG  +SW K F  
Sbjct: 238 EIFNEVPLPDEIISNESFKISIAVLGGCLCLPVNYQTTKIDVWVMKEYGCRDSWCKHF-- 295

Query: 72  RHELGLTC--FLEPLCFINKG 16
              L  +C  FL PL + + G
Sbjct: 296 --TLVKSCLDFLRPLGYCSDG 314


>ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|355483283|gb|AES64486.1|
           F-box protein [Medicago truncatula]
          Length = 325

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
 Frame = -1

Query: 240 FREVPCPDHLICNSCNSSVATLDGNLCV-VSYDEAFFELWVMKEYGASESWFKQFIIRHE 64
           F  VP P+ +   S   +V  L+G LC+ ++Y    FE+WVMKEYG+++SW K F +   
Sbjct: 159 FNVVPLPEEVNSESFEINVVVLEGCLCMTLNYRNTEFEVWVMKEYGSTDSWCKLFTLME- 217

Query: 63  LGLTCFL------EPLCFINKG 16
               CFL       PLC+ + G
Sbjct: 218 ---PCFLVDLEIFRPLCYSSDG 236


>ref|XP_003594085.1| F-box family protein, partial [Medicago truncatula]
           gi|355483133|gb|AES64336.1| F-box family protein,
           partial [Medicago truncatula]
          Length = 595

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = -1

Query: 246 ESFREV-PCPDHLICNSCNSSVATLDGNLCVVSYDEAFFELWVMKEYGASESWFKQFIIR 70
           ES+RE+ P PDH +    N  +  L   LC+ S D  F ++W+MKEYG ++SW K F + 
Sbjct: 335 ESYRELLPPPDHRVITVVNFMLGVLRDCLCLFSNDPTFTDVWLMKEYGNNDSWTKLFRLP 394

Query: 69  H 67
           H
Sbjct: 395 H 395


>ref|XP_003594084.1| F-box protein [Medicago truncatula] gi|355483132|gb|AES64335.1|
           F-box protein [Medicago truncatula]
          Length = 772

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = -1

Query: 246 ESFREV-PCPDHLICNSCNSSVATLDGNLCVVSYDEAFFELWVMKEYGASESWFKQFIIR 70
           ES+RE+ P PDH +    N  +  L   LC+ S D  F ++W+MKEYG ++SW K F + 
Sbjct: 57  ESYRELLPPPDHRVITVVNFMLGVLRDCLCLFSNDPTFTDVWLMKEYGNNDSWTKLFRLP 116

Query: 69  H 67
           H
Sbjct: 117 H 117