BLASTX nr result

ID: Coptis25_contig00012180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012180
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282326.1| PREDICTED: thioredoxin-like 2, chloroplastic...   291   3e-76
ref|XP_004133814.1| PREDICTED: thioredoxin-like 2, chloroplastic...   286   9e-75
ref|XP_002309223.1| predicted protein [Populus trichocarpa] gi|2...   284   3e-74
ref|XP_002330513.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72
ref|XP_002514101.1| Thioredoxin, putative [Ricinus communis] gi|...   276   5e-72

>ref|XP_002282326.1| PREDICTED: thioredoxin-like 2, chloroplastic [Vitis vinifera]
            gi|297738677|emb|CBI27922.3| unnamed protein product
            [Vitis vinifera]
          Length = 207

 Score =  291 bits (744), Expect = 3e-76
 Identities = 147/214 (68%), Positives = 169/214 (78%), Gaps = 3/214 (1%)
 Frame = -3

Query: 1031 MADVFRISPFQTAVSHTYTCSSNSSQLLRLSI---RKNNKRVCXXXXXXXXXXSFPLVLR 861
            MADVFR+S      S   T  S+S   L+  +   +K +KR+           +F    R
Sbjct: 1    MADVFRLS------SSLLTSFSSSLSFLQPGLAPTQKLDKRIYSVANWDVARLAF----R 50

Query: 860  RQKRFLSFKVHAAVAETEGPKWWERNAGPNMVDIHSTEEFLNALSQAGEKLVVVEFYGTW 681
             +KR  SFKV+A VAETE PKWWE+NAGPNM+DIHST+EFL ALSQAG+KLV+VEFYGTW
Sbjct: 51   PRKRLPSFKVNARVAETEQPKWWEKNAGPNMIDIHSTQEFLGALSQAGDKLVIVEFYGTW 110

Query: 680  CGSCRALFPKLCRTANENPDIVFLKVNFDENKPMCKSLNVRVLPYFHFYRGSDGQLESFS 501
            C SCRALFPKLCRTA E+P+I+FLKVNFDENKPMCK+LNV+VLPYFHFYRG+DGQLESFS
Sbjct: 111  CASCRALFPKLCRTAEEHPEILFLKVNFDENKPMCKNLNVKVLPYFHFYRGADGQLESFS 170

Query: 500  CSLAKFQKIKDAIATHNTARCSIGPPKGVGDIDL 399
            CSLAKFQKIKDAI THNTARCSIGPPKGVGD+ L
Sbjct: 171  CSLAKFQKIKDAIRTHNTARCSIGPPKGVGDLSL 204


>ref|XP_004133814.1| PREDICTED: thioredoxin-like 2, chloroplastic-like [Cucumis sativus]
            gi|449477927|ref|XP_004155164.1| PREDICTED:
            thioredoxin-like 2, chloroplastic-like [Cucumis sativus]
          Length = 224

 Score =  286 bits (731), Expect = 9e-75
 Identities = 148/225 (65%), Positives = 170/225 (75%), Gaps = 4/225 (1%)
 Frame = -3

Query: 1031 MADVFRISPFQTAVSHTYT----CSSNSSQLLRLSIRKNNKRVCXXXXXXXXXXSFPLVL 864
            MADVFR S      S T       SS SS    L   +N ++              PL  
Sbjct: 1    MADVFRFSSHSFYFSSTSLPPSFASSYSSLHPSLPSIQNPEKRSSPMPCYSTSHVMPLSF 60

Query: 863  RRQKRFLSFKVHAAVAETEGPKWWERNAGPNMVDIHSTEEFLNALSQAGEKLVVVEFYGT 684
            R +KR +SFKV AAVAE + PKWWE+NA PNM+DIHST+EFL ALS+AG++LV+VEFYGT
Sbjct: 61   RPRKRLVSFKVQAAVAEKDQPKWWEKNA-PNMIDIHSTQEFLTALSEAGDRLVIVEFYGT 119

Query: 683  WCGSCRALFPKLCRTANENPDIVFLKVNFDENKPMCKSLNVRVLPYFHFYRGSDGQLESF 504
            WC SCRALFP+LCRTA+E+P+I+FLKVNFDENKPMCKSLNV+VLPYFHFYRG+DGQLESF
Sbjct: 120  WCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESF 179

Query: 503  SCSLAKFQKIKDAIATHNTARCSIGPPKGVGDIDLSGSSSPAKDK 369
            SCSLAKFQKIKDAI  HNTARCSIGPPKGVGD+ L  S +P KDK
Sbjct: 180  SCSLAKFQKIKDAIEMHNTARCSIGPPKGVGDLILEPSLAP-KDK 223


>ref|XP_002309223.1| predicted protein [Populus trichocarpa] gi|222855199|gb|EEE92746.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score =  284 bits (727), Expect = 3e-74
 Identities = 142/221 (64%), Positives = 170/221 (76%)
 Frame = -3

Query: 1031 MADVFRISPFQTAVSHTYTCSSNSSQLLRLSIRKNNKRVCXXXXXXXXXXSFPLVLRRQK 852
            MADV  +  F++    +Y  +SN+S  L+  +  N               S P     + 
Sbjct: 1    MADVVGLPSFRSLRVPSYLLASNNSTSLQPLLSHNQINFSDKRISLSRFSSSP-----RD 55

Query: 851  RFLSFKVHAAVAETEGPKWWERNAGPNMVDIHSTEEFLNALSQAGEKLVVVEFYGTWCGS 672
            +FLSFKVHA VAET+ PKWWERNAGPNM+DIHST+EFL+ALSQA ++LV+VEFYGTWC S
Sbjct: 56   QFLSFKVHATVAETDQPKWWERNAGPNMIDIHSTDEFLSALSQAEDRLVIVEFYGTWCAS 115

Query: 671  CRALFPKLCRTANENPDIVFLKVNFDENKPMCKSLNVRVLPYFHFYRGSDGQLESFSCSL 492
            CRALFPKLCRTA ++P+I+FLKVNFDENKPMCKSLNV+VLPYFHFYRG+ GQLESFSCSL
Sbjct: 116  CRALFPKLCRTAEDHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSL 175

Query: 491  AKFQKIKDAIATHNTARCSIGPPKGVGDIDLSGSSSPAKDK 369
            AKFQKIKD+I  HNTARCSIGPPKGVG++ L  S S ++DK
Sbjct: 176  AKFQKIKDSIEMHNTARCSIGPPKGVGELTLE-SVSASQDK 215


>ref|XP_002330513.1| predicted protein [Populus trichocarpa] gi|222872447|gb|EEF09578.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  279 bits (713), Expect = 1e-72
 Identities = 128/163 (78%), Positives = 147/163 (90%)
 Frame = -3

Query: 854 KRFLSFKVHAAVAETEGPKWWERNAGPNMVDIHSTEEFLNALSQAGEKLVVVEFYGTWCG 675
           K+ LSFKVHA VAET+ PKWWE+NAGPNM+DIHSTEEFL ALS+AG++LV+VEFYGTWC 
Sbjct: 18  KQLLSFKVHATVAETDQPKWWEKNAGPNMIDIHSTEEFLRALSEAGDRLVIVEFYGTWCA 77

Query: 674 SCRALFPKLCRTANENPDIVFLKVNFDENKPMCKSLNVRVLPYFHFYRGSDGQLESFSCS 495
           SCRALFPKLCRTA E+P+I+FLKVNF+ENKPMC+SLNV+VLPYFHFYRG+ GQLESFSCS
Sbjct: 78  SCRALFPKLCRTAEEHPEILFLKVNFNENKPMCRSLNVKVLPYFHFYRGAHGQLESFSCS 137

Query: 494 LAKFQKIKDAIATHNTARCSIGPPKGVGDIDLSGSSSPAKDKT 366
           L KFQKIKDAI  HNTARCSIGPPK VG++ L   S+P +DKT
Sbjct: 138 LVKFQKIKDAIEMHNTARCSIGPPKAVGELTLESISAP-QDKT 179


>ref|XP_002514101.1| Thioredoxin, putative [Ricinus communis]
           gi|223546557|gb|EEF48055.1| Thioredoxin, putative
           [Ricinus communis]
          Length = 227

 Score =  276 bits (707), Expect = 5e-72
 Identities = 125/161 (77%), Positives = 146/161 (90%)
 Frame = -3

Query: 857 QKRFLSFKVHAAVAETEGPKWWERNAGPNMVDIHSTEEFLNALSQAGEKLVVVEFYGTWC 678
           +K+ LSFKVHA VAET+ PKWWERNAGPNM+DIHST+EFL+ALSQAG++LV+VEFYGTWC
Sbjct: 61  RKQLLSFKVHATVAETDQPKWWERNAGPNMIDIHSTQEFLSALSQAGDRLVIVEFYGTWC 120

Query: 677 GSCRALFPKLCRTANENPDIVFLKVNFDENKPMCKSLNVRVLPYFHFYRGSDGQLESFSC 498
            SCRALFPKLCRTA E+P+I+FLKVNFDENKPMCKSLNV+VLPYFHFYRG+ GQLESFSC
Sbjct: 121 ASCRALFPKLCRTAEEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSC 180

Query: 497 SLAKFQKIKDAIATHNTARCSIGPPKGVGDIDLSGSSSPAK 375
           SLAKFQKIKDAIA H+T + S GPPKG+G++ L   S+P +
Sbjct: 181 SLAKFQKIKDAIALHSTTQSSSGPPKGIGELTLESVSAPTE 221


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