BLASTX nr result

ID: Coptis25_contig00012178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012178
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28246.3| unnamed protein product [Vitis vinifera]              230   2e-58
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...   223   3e-56
ref|XP_004166096.1| PREDICTED: uncharacterized LOC101204737, par...   192   4e-47
ref|XP_004150209.1| PREDICTED: uncharacterized protein LOC101204...   192   4e-47

>emb|CBI28246.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  230 bits (587), Expect = 2e-58
 Identities = 117/189 (61%), Positives = 141/189 (74%)
 Frame = +2

Query: 2   PSITFDSSFLKVLAPVLKATLDHANSAISKSTIIFWNRTYGNRVKLDYPQSLLPVLDKLS 181
           P I FDSSFL++ AP+L+ TLDH N +IS STI FWN TY  +++LDYPQSL  VLDKLS
Sbjct: 93  PPIIFDSSFLELQAPLLEKTLDHPNPSISDSTIAFWNSTYSEQIQLDYPQSLCHVLDKLS 152

Query: 182 RKGKISIQKRSPSYLVNGHSTEVMGAPLGYRVAATQNKISKRIEFTENKSTDCEGTDKVV 361
           R G+I++ KR+PS+L   +S   +  P  Y+V AT+N+ SKR+E  E    D    DK  
Sbjct: 153 RSGRINLCKRTPSFLQKCNSRVEVATPQRYKVTATKNRSSKRVELVEATVNDSGDKDKPS 212

Query: 362 HGSKRKKLELTEHQKEVRRAQQGRGRDCCGHGPGIRTYTSVDFSQANEDSQESQELRNPE 541
              KRK+LELTEHQKEVRRAQQGR RD  GHGPGIRTYTSVDFSQ NE+SQESQE+RNPE
Sbjct: 213 PSLKRKRLELTEHQKEVRRAQQGRERDTNGHGPGIRTYTSVDFSQGNEESQESQEIRNPE 272

Query: 542 AILEMLRKA 568
           +I E LR+A
Sbjct: 273 SIFEKLRRA 281


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  224 bits (570), Expect = 2e-56
 Identities = 112/188 (59%), Positives = 142/188 (75%)
 Frame = +2

Query: 2    PSITFDSSFLKVLAPVLKATLDHANSAISKSTIIFWNRTYGNRVKLDYPQSLLPVLDKLS 181
            P I FDSS LK+ AP+L+ TLDH  S IS+ T+ FWN TYG ++KLDYP+SLL +LDKLS
Sbjct: 928  PPIVFDSSLLKLQAPLLEKTLDHPKSTISELTVTFWNSTYGKQIKLDYPESLLDILDKLS 987

Query: 182  RKGKISIQKRSPSYLVNGHSTEVMGAPLGYRVAATQNKISKRIEFTENKSTDCEGTDKVV 361
            R  +I++Q +S  +LV  HS   + A    RV AT ++ SKR+E  E+ +   E  +++ 
Sbjct: 988  RNKRINLQTKSLPFLVKCHSISEVTAQRS-RVTATNSRNSKRVELVEDTANQFEPENRLG 1046

Query: 362  HGSKRKKLELTEHQKEVRRAQQGRGRDCCGHGPGIRTYTSVDFSQANEDSQESQELRNPE 541
              SKRK++ LTEHQKEVRRAQQGRG DC GHGPGIRTYTSVDFSQ NEDSQESQE+R+PE
Sbjct: 1047 SSSKRKRVGLTEHQKEVRRAQQGRGMDCSGHGPGIRTYTSVDFSQGNEDSQESQEIRDPE 1106

Query: 542  AILEMLRK 565
            +ILE+LR+
Sbjct: 1107 SILELLRR 1114


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
            gi|223528402|gb|EEF30438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1038

 Score =  223 bits (568), Expect = 3e-56
 Identities = 112/190 (58%), Positives = 141/190 (74%)
 Frame = +2

Query: 2    PSITFDSSFLKVLAPVLKATLDHANSAISKSTIIFWNRTYGNRVKLDYPQSLLPVLDKLS 181
            P I FDSSFLK  A +L+ TLDH +S IS+ TI FWN  YG + KLDYP+SLL +LDKLS
Sbjct: 850  PPIVFDSSFLKCQASILEKTLDHPDSTISELTITFWNSMYGEQSKLDYPESLLDILDKLS 909

Query: 182  RKGKISIQKRSPSYLVNGHSTEVMGAPLGYRVAATQNKISKRIEFTENKSTDCEGTDKVV 361
            R  +I+++K+SP +L+  +    + A   +RV AT    SKR+E  ++     E  DK+ 
Sbjct: 910  RNKRINLRKKSPLFLIKCNYIPELTAQT-HRVTATHTGSSKRVELLQDAVNQFEHKDKLH 968

Query: 362  HGSKRKKLELTEHQKEVRRAQQGRGRDCCGHGPGIRTYTSVDFSQANEDSQESQELRNPE 541
              SKRK+LELTEHQKEVRRAQQGRG DC GHGPG+RTYT+VDFSQ NEDSQ+SQE+RNPE
Sbjct: 969  SSSKRKRLELTEHQKEVRRAQQGRGMDCSGHGPGVRTYTNVDFSQGNEDSQDSQEIRNPE 1028

Query: 542  AILEMLRKAL 571
            +ILEMLR+ +
Sbjct: 1029 SILEMLRRVV 1038


>ref|XP_004166096.1| PREDICTED: uncharacterized LOC101204737, partial [Cucumis sativus]
          Length = 815

 Score =  192 bits (489), Expect = 4e-47
 Identities = 99/189 (52%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
 Frame = +2

Query: 2    PSITFDSSFLKVLAPVLKATLDHANSAISKSTIIFWNRTYGNRVKLDYPQSLLPVLDKLS 181
            PS+  DS+FLK+LAP+L+ TLDH N +IS+ TI FW+ ++G  +   YPQ+LLP+L KLS
Sbjct: 624  PSLVSDSAFLKLLAPLLEKTLDHPNPSISERTITFWSSSFGEHLFASYPQNLLPILHKLS 683

Query: 182  RKGKISIQKRSPSYLVN--GHSTEVMGAPLGYRVAATQNKISKRIEFTENKSTDCEGTDK 355
            R G+I +QKR    +        E    P  +RV+AT  K SKRI+     + D    D 
Sbjct: 684  RNGRIKLQKRCLWVIEQCPARQEENADPPFSHRVSATSIKSSKRIQIMTTTNHDKHKEDT 743

Query: 356  VVHGSKRKKLELTEHQKEVRRAQQGRGRDCCGHGPGIRTYTSVDFSQANEDSQESQELRN 535
                 KRKK++LT+HQKEVRRAQQGR RDC GHGPGIRTYTS+DFSQ  +DS+ESQ+ +N
Sbjct: 744  PTSNPKRKKIKLTQHQKEVRRAQQGRSRDCGGHGPGIRTYTSLDFSQVVDDSEESQDTQN 803

Query: 536  PEAILEMLR 562
             ++ILEM R
Sbjct: 804  LDSILEMAR 812


>ref|XP_004150209.1| PREDICTED: uncharacterized protein LOC101204737 [Cucumis sativus]
          Length = 534

 Score =  192 bits (489), Expect = 4e-47
 Identities = 99/189 (52%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
 Frame = +2

Query: 2   PSITFDSSFLKVLAPVLKATLDHANSAISKSTIIFWNRTYGNRVKLDYPQSLLPVLDKLS 181
           PS+  DS+FLK+LAP+L+ TLDH N +IS+ TI FW+ ++G  +   YPQ+LLP+L KLS
Sbjct: 343 PSLVSDSAFLKLLAPLLEKTLDHPNPSISERTITFWSSSFGEHLFASYPQNLLPILHKLS 402

Query: 182 RKGKISIQKRSPSYLVN--GHSTEVMGAPLGYRVAATQNKISKRIEFTENKSTDCEGTDK 355
           R G+I +QKR    +        E    P  +RV+AT  K SKRI+     + D    D 
Sbjct: 403 RNGRIKLQKRCLWVIEQCPARQEENADPPFSHRVSATSIKSSKRIQIMTTTNHDKHKEDT 462

Query: 356 VVHGSKRKKLELTEHQKEVRRAQQGRGRDCCGHGPGIRTYTSVDFSQANEDSQESQELRN 535
                KRKK++LT+HQKEVRRAQQGR RDC GHGPGIRTYTS+DFSQ  +DS+ESQ+ +N
Sbjct: 463 PTSNPKRKKIKLTQHQKEVRRAQQGRSRDCGGHGPGIRTYTSLDFSQVVDDSEESQDTQN 522

Query: 536 PEAILEMLR 562
            ++ILEM R
Sbjct: 523 LDSILEMAR 531


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