BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012153
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   840   0.0  
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   835   0.0  
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   833   0.0  
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   829   0.0  
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   828   0.0  

>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  840 bits (2170), Expect = 0.0
 Identities = 405/454 (89%), Positives = 432/454 (95%)
 Frame = +1

Query: 1    PQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQPQTMASYSVSDAVSTYYLYMTYVHPF 180
            PQGS GLKAVTK KLGYDPLEVNPEDMVRFAKE+PQTMASYSVSDAV+TYYLYMTYVHPF
Sbjct: 393  PQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQTMASYSVSDAVATYYLYMTYVHPF 452

Query: 181  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKYQADLEKFHNSHLLESET 360
            IFSLATIIPM PDEVLRKGSGTLCEMLLMVQAYKANVICPNK+Q+D EKF+ +HLL+SET
Sbjct: 453  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYKNHLLDSET 512

Query: 361  YIGGHVECLESGVFRSDLPTKFQLDRSAYEQLINNLDRDLQYAIKVEGKMDVESVSNYDG 540
            YIGGHVECLESGVFRSDLPT F+LD SAY+QLI NLDRDLQYAI VE KMD++SVSNYD 
Sbjct: 513  YIGGHVECLESGVFRSDLPTHFKLDPSAYDQLIGNLDRDLQYAIIVESKMDLDSVSNYDE 572

Query: 541  VKNAIMEKLISLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNR 720
            VKNAIMEKL+ LRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIV+DE+CTACDFNR
Sbjct: 573  VKNAIMEKLVMLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNR 632

Query: 721  PGKTCLRKLEWVWRGEMFMAKKSDYYHLKRQIESELVDRVDGQWSKSFLDLPKTEQQTKL 900
            P KTCLRKLEWVWRGE+FMA KSDYYHLK+QIESE VD +DGQ SK FLDLPK EQQ+KL
Sbjct: 633  PDKTCLRKLEWVWRGEIFMANKSDYYHLKKQIESEFVDGIDGQLSKPFLDLPKVEQQSKL 692

Query: 901  KDRLRKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGK 1080
            K+RL+KYCQKAYKRV+DKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNK+WKGK
Sbjct: 693  KERLKKYCQKAYKRVIDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKLWKGK 752

Query: 1081 LADAKASGNSMKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 1260
            L++AK SGN +KIQEAQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT
Sbjct: 753  LSEAKTSGNPIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 812

Query: 1261 GAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 1362
            GAKIIQNARLLVEKIG+PLELDTDGIWC LPGSF
Sbjct: 813  GAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSF 846


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  835 bits (2158), Expect = 0.0
 Identities = 407/454 (89%), Positives = 431/454 (94%)
 Frame = +1

Query: 1    PQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQPQTMASYSVSDAVSTYYLYMTYVHPF 180
            PQGSQGLKAVTK KLGYDPLEVNPEDMVRFAKE PQ MASYSVSDAVSTYYLYMTYVHPF
Sbjct: 391  PQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKELPQMMASYSVSDAVSTYYLYMTYVHPF 450

Query: 181  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKYQADLEKFHNSHLLESET 360
            IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNK+Q+D EKF+++ LLESET
Sbjct: 451  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYHNQLLESET 510

Query: 361  YIGGHVECLESGVFRSDLPTKFQLDRSAYEQLINNLDRDLQYAIKVEGKMDVESVSNYDG 540
            YIGGHVECLESGVFRSDLPT F+LD S+YEQLI NLDRDLQYAI+VEGKMDVESVSNYD 
Sbjct: 511  YIGGHVECLESGVFRSDLPTSFKLDPSSYEQLIVNLDRDLQYAIRVEGKMDVESVSNYDE 570

Query: 541  VKNAIMEKLISLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNR 720
            VKNAI EKL+ L+ EP+REE PLIYHLDVAAMYPNIILTNRLQP SIVSDE+CTACDFNR
Sbjct: 571  VKNAIKEKLMKLQGEPIREEFPLIYHLDVAAMYPNIILTNRLQPSSIVSDEICTACDFNR 630

Query: 721  PGKTCLRKLEWVWRGEMFMAKKSDYYHLKRQIESELVDRVDGQWSKSFLDLPKTEQQTKL 900
            PGK CLRKLEWVWRGE FMAKKSDYYHLKRQIESELVD  D ++SKSF+DLPKTEQQ KL
Sbjct: 631  PGKNCLRKLEWVWRGEAFMAKKSDYYHLKRQIESELVDGGDSRFSKSFIDLPKTEQQLKL 690

Query: 901  KDRLRKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGK 1080
            K+RL+KYCQKAYKRVLDKP TELREAGICMREN FY+DTVRSFRDRRYEYKGLNKVWKGK
Sbjct: 691  KERLKKYCQKAYKRVLDKPATELREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGK 750

Query: 1081 LADAKASGNSMKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 1260
            L++AKASGNS++IQEAQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT
Sbjct: 751  LSEAKASGNSIRIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 810

Query: 1261 GAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 1362
            GAKIIQNARLL+EKIGRPLELDTDGIWC LPGSF
Sbjct: 811  GAKIIQNARLLIEKIGRPLELDTDGIWCVLPGSF 844


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  833 bits (2152), Expect = 0.0
 Identities = 402/454 (88%), Positives = 430/454 (94%)
 Frame = +1

Query: 1    PQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQPQTMASYSVSDAVSTYYLYMTYVHPF 180
            PQGSQGLKAVTK KLGYDPLEVNPEDMVRFAKE+PQ MASYSVSDAV+TYYLYMTYVHPF
Sbjct: 392  PQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPF 451

Query: 181  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKYQADLEKFHNSHLLESET 360
            IFSLATIIPM PDEVLRKGSGTLCEMLLMVQAY ANVICPNK+Q+D +KF+ SHLLESET
Sbjct: 452  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYMANVICPNKHQSDQDKFYKSHLLESET 511

Query: 361  YIGGHVECLESGVFRSDLPTKFQLDRSAYEQLINNLDRDLQYAIKVEGKMDVESVSNYDG 540
            YIGGHVECLESGVFRSDLPT F+LD SAYE LI NLDRDLQYAI+VEGKMD++ +SNYD 
Sbjct: 512  YIGGHVECLESGVFRSDLPTSFKLDPSAYELLIKNLDRDLQYAIRVEGKMDLDLISNYDE 571

Query: 541  VKNAIMEKLISLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNR 720
            VKN IMEKL+ LRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIV+DE+CTACDFNR
Sbjct: 572  VKNVIMEKLVCLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNR 631

Query: 721  PGKTCLRKLEWVWRGEMFMAKKSDYYHLKRQIESELVDRVDGQWSKSFLDLPKTEQQTKL 900
            P KTCLRKLEWVWRGE+FMAKKSDYYHLK+QIESE VD  DGQ+SKSFLDL K +QQ+KL
Sbjct: 632  PDKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFVDGTDGQFSKSFLDLSKMDQQSKL 691

Query: 901  KDRLRKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGK 1080
            K+RL+KYCQKAYKRVLDKPVTE+REAGICMREN FYVDTVRSFRDRRYEYKGLNKVWKGK
Sbjct: 692  KERLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGK 751

Query: 1081 LADAKASGNSMKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 1260
            L++AKASGNS+KIQEA DMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT
Sbjct: 752  LSEAKASGNSIKIQEAHDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 811

Query: 1261 GAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 1362
            GAKIIQNARLLV+KIG+PLELDTDGIWC LPG F
Sbjct: 812  GAKIIQNARLLVDKIGKPLELDTDGIWCVLPGCF 845


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  829 bits (2142), Expect = 0.0
 Identities = 407/464 (87%), Positives = 431/464 (92%), Gaps = 10/464 (2%)
 Frame = +1

Query: 1    PQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQPQTMASYSVSDAVSTYYLYMTYVHPF 180
            PQGSQGLKAVTK KLGYDPLEVNPEDMVRFAKE+PQ MASYSVSDAV+TYYLY TYVHPF
Sbjct: 392  PQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPF 451

Query: 181  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKYQADLEKFHNSHLLESET 360
            IFSLATIIPM PDEVLRKGSGTLCEMLLMVQAYKANVICPNK+Q+D EKF+N+HLLESET
Sbjct: 452  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESET 511

Query: 361  YIGGHVECLESGVFRSDLPTKFQLDRSAYEQLINNLDRDLQYAIKVEGKMDVESVSNYDG 540
            YIGGHVECLESGVFRSD+P+ F L+ SAY+QLINNLDRDLQYAI VEGKMD+E VSNYD 
Sbjct: 512  YIGGHVECLESGVFRSDIPSSFTLEPSAYQQLINNLDRDLQYAITVEGKMDLEFVSNYDE 571

Query: 541  VKNAIMEKLISLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNR 720
            VKNAIMEKL+ LRD P+REECPLIYHLDVAAMYPNIILTNRLQPPSIV++EVCTACDFNR
Sbjct: 572  VKNAIMEKLVKLRDAPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTEEVCTACDFNR 631

Query: 721  PGKTCLRKLEWVWRGEMFMAKKSDYYHLKRQIESELVD----------RVDGQWSKSFLD 870
            PGKTCLRKLEWVWRGE FMAKKSDYY LK QIESE VD              + SKSFLD
Sbjct: 632  PGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSEKNNKALTHYSEKSSKSFLD 691

Query: 871  LPKTEQQTKLKDRLRKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 1050
            LPK EQQ++LK+RL+KYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY
Sbjct: 692  LPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEY 751

Query: 1051 KGLNKVWKGKLADAKASGNSMKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYS 1230
            KGLNKVWKGKL++AKASGNSMKIQEAQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYS
Sbjct: 752  KGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYS 811

Query: 1231 MEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 1362
            MEMAGVVTYTGAKIIQNARLLVEKIG+PLELDTDGIWCALPGSF
Sbjct: 812  MEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSF 855


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  828 bits (2138), Expect = 0.0
 Identities = 403/454 (88%), Positives = 431/454 (94%)
 Frame = +1

Query: 1    PQGSQGLKAVTKTKLGYDPLEVNPEDMVRFAKEQPQTMASYSVSDAVSTYYLYMTYVHPF 180
            PQGS GLKAVTK KLGYDPLEVNPEDMVRFA E+PQ MASYSVSDAV+TYYLYMTYVHPF
Sbjct: 392  PQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEKPQMMASYSVSDAVATYYLYMTYVHPF 451

Query: 181  IFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKYQADLEKFHNSHLLESET 360
            IFSLATIIPM PDEVLRKGSGTLCEMLLMVQAYKANV+CPNK+Q+D EKF+++ LLESET
Sbjct: 452  IFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESET 511

Query: 361  YIGGHVECLESGVFRSDLPTKFQLDRSAYEQLINNLDRDLQYAIKVEGKMDVESVSNYDG 540
            YIGGHVECLESGVFRSDLPT F+LD SAY+QLINNLDRDLQYAI+VEGKM++ESVSNY  
Sbjct: 512  YIGGHVECLESGVFRSDLPTSFRLDPSAYDQLINNLDRDLQYAIQVEGKMELESVSNYSD 571

Query: 541  VKNAIMEKLISLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNR 720
            VKNAIMEKLI LRDEPVREE PLIYHLDVAAMYPNIILTNRLQP SIV+DEVCTACDFNR
Sbjct: 572  VKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPSSIVTDEVCTACDFNR 631

Query: 721  PGKTCLRKLEWVWRGEMFMAKKSDYYHLKRQIESELVDRVDGQWSKSFLDLPKTEQQTKL 900
            PGKTCLRKLEWVWRGE+FMAKKSDYYHLK+QIESE VD  + + SKSFL+LPK EQQ KL
Sbjct: 632  PGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGNVRSSKSFLELPKLEQQAKL 691

Query: 901  KDRLRKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGK 1080
            KDRL+KYCQKAYKRVLDKPVTE+REAGICMREN FY+DTVRSFRDRRYEYKGLNKVWKGK
Sbjct: 692  KDRLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGK 751

Query: 1081 LADAKASGNSMKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 1260
            L +AK+SGNS+KIQEAQDMVV+YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT
Sbjct: 752  LTEAKSSGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYT 811

Query: 1261 GAKIIQNARLLVEKIGRPLELDTDGIWCALPGSF 1362
            GAKIIQNARLL+EKIG+PLELDTDGIWCALPGSF
Sbjct: 812  GAKIIQNARLLIEKIGKPLELDTDGIWCALPGSF 845