BLASTX nr result

ID: Coptis25_contig00012132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012132
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521019.1| protein transporter, putative [Ricinus commu...   152   3e-35
ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   148   5e-34
ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   146   2e-33
gb|AFW74080.1| BS14b [Zea mays]                                       145   3e-33

>ref|XP_002521019.1| protein transporter, putative [Ricinus communis]
           gi|223539856|gb|EEF41436.1| protein transporter,
           putative [Ricinus communis]
          Length = 125

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/87 (86%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
 Frame = -3

Query: 453 DGIEEGGIRATS-YSHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVESHNRLLDRTGN 277
           DGIEEGGIRA+S YSHEIDEQDN+RA++GLQDRVILLKRLSGDI+EEVE HNR+LDR GN
Sbjct: 19  DGIEEGGIRASSSYSHEIDEQDNERAMEGLQDRVILLKRLSGDIHEEVEGHNRMLDRMGN 78

Query: 276 EMDASRGILSGTMDRFKMVFETKSSRR 196
           +MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 79  DMDSSRGVLSGTMDRFKMVFETKSSRR 105


>ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297741938|emb|CBI33373.3| unnamed protein product
           [Vitis vinifera]
          Length = 122

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/87 (83%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = -3

Query: 453 DGIEEGGIRATS-YSHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVESHNRLLDRTGN 277
           DGIEEGGIRA+S YSHEIDE DN+ A+DGL+DRV++LKRL+GDI+EEVESHNR+LDR GN
Sbjct: 16  DGIEEGGIRASSSYSHEIDEVDNETAVDGLEDRVVMLKRLTGDIHEEVESHNRMLDRVGN 75

Query: 276 EMDASRGILSGTMDRFKMVFETKSSRR 196
           EMDASRGILSGTM+RFKMVFETKSSRR
Sbjct: 76  EMDASRGILSGTMERFKMVFETKSSRR 102


>ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|222857086|gb|EEE94633.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/88 (84%), Positives = 83/88 (94%), Gaps = 2/88 (2%)
 Frame = -3

Query: 453 DGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVESHNRLLDRTG 280
           DGIEEGGIRA+S   SHEIDEQDN+RAL+GLQDRVILLKRLSGDINEEV++HN +LDR G
Sbjct: 16  DGIEEGGIRASSSYSSHEIDEQDNERALEGLQDRVILLKRLSGDINEEVDNHNLMLDRMG 75

Query: 279 NEMDASRGILSGTMDRFKMVFETKSSRR 196
           N+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 76  NDMDSSRGVLSGTMDRFKMVFETKSSRR 103


>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/88 (84%), Positives = 82/88 (93%), Gaps = 2/88 (2%)
 Frame = -3

Query: 453 DGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVESHNRLLDRTG 280
           DGIEEGGIRA+S   SHEIDE DN+RA+DGLQDRV LLKRL+GDI+EEVESHNR+LDR G
Sbjct: 16  DGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDIHEEVESHNRMLDRVG 75

Query: 279 NEMDASRGILSGTMDRFKMVFETKSSRR 196
           N+MDASRGILSGTMDRFKMVFET+SSRR
Sbjct: 76  NDMDASRGILSGTMDRFKMVFETRSSRR 103


>gb|AFW74080.1| BS14b [Zea mays]
          Length = 236

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/87 (82%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
 Frame = -3

Query: 453 DGIEEGGIRATSYS-HEIDEQDNDRALDGLQDRVILLKRLSGDINEEVESHNRLLDRTGN 277
           DGIEEGGIRATSYS HEIDEQ+ND A+DGLQDRV +LKRLSGDI+EEVE+HNR+LDR GN
Sbjct: 130 DGIEEGGIRATSYSSHEIDEQENDGAIDGLQDRVSILKRLSGDIHEEVETHNRMLDRMGN 189

Query: 276 EMDASRGILSGTMDRFKMVFETKSSRR 196
           +MD SRG LSGT+D+FKMVFETKSSRR
Sbjct: 190 DMDTSRGFLSGTVDKFKMVFETKSSRR 216


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