BLASTX nr result

ID: Coptis25_contig00012118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012118
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270151.1| PREDICTED: probable LRR receptor-like serine...   106   2e-21
ref|XP_002331833.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002333752.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002262904.2| PREDICTED: LRR receptor-like serine/threonin...   102   4e-20

>ref|XP_002270151.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180 [Vitis vinifera]
          Length = 917

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/138 (42%), Positives = 78/138 (56%)
 Frame = +3

Query: 3   LPNWLYPLKNLEILDLSANHFDGPIPESVGALLRLKELDLSDNLLTGVVSEVHLAXXXXX 182
           LP+ +  L ++  LDLS N F GPIP S+G LL L+ LD+S+NL  GVVSE HL      
Sbjct: 320 LPSNIGNLTSVVHLDLSWNSFHGPIPASLGELLSLRFLDISENLFIGVVSEKHLTNLKYL 379

Query: 183 XXXXXXXXXXXXXIRSNWIPPFQLDFIYMSHCEVGPQFPEWLRTQTTLMVLHMHNSDISD 362
                        + SNW PPFQL  +  S C +GPQFP WL+TQ  L +L M  + ISD
Sbjct: 380 KELIASSNSLTLQVSSNWTPPFQLTSVNFSFCLLGPQFPAWLQTQKYLKILDMSKTGISD 439

Query: 363 SLSNCYGNLSSLETLDLS 416
            +   +  L  ++ ++LS
Sbjct: 440 VIPAWFWMLPHIDVINLS 457


>ref|XP_002331833.1| predicted protein [Populus trichocarpa] gi|222875071|gb|EEF12202.1|
           predicted protein [Populus trichocarpa]
          Length = 994

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
 Frame = +3

Query: 24  LKNLEILDLSANHFDGPIPESVGALLRLKELDLSDNLLTGVVSEVHLAXXXXXXXXXXXX 203
           L +L  L +S N  DG + ES+G+L +L++L +  N L GV+SE H +            
Sbjct: 411 LSSLRELGISNNRLDGNVSESIGSLFQLEKLHVGGNSLQGVMSEAHFSNLSKLTVLDLTD 470

Query: 204 XXXXXXIRSNWIPPFQLDFIYMSHCEVGPQFPEWLRTQTTLMVLHMHNSDISDSLSNCYG 383
                   SNW P FQLD I++S C++GP FP+WLR QT  M L +  S ISD++ N + 
Sbjct: 471 NSLALKFESNWAPTFQLDRIFLSSCDLGPPFPQWLRNQTNFMELDISGSRISDTIPNWFW 530

Query: 384 NLSS--LETLDLS 416
           NLS+  LE LDLS
Sbjct: 531 NLSNSKLELLDLS 543


>ref|XP_002333752.1| predicted protein [Populus trichocarpa] gi|222838400|gb|EEE76765.1|
           predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
 Frame = +3

Query: 24  LKNLEILDLSANHFDGPIPESVGALLRLKELDLSDNLLTGVVSEVHLAXXXXXXXXXXXX 203
           L +L  L +S N  DG + ES+G+L +L++L +  N L GV+SE H +            
Sbjct: 411 LSSLRELGISNNRLDGNVSESIGSLFQLEKLHVGGNSLQGVMSEAHFSNLSKLTVLDLTD 470

Query: 204 XXXXXXIRSNWIPPFQLDFIYMSHCEVGPQFPEWLRTQTTLMVLHMHNSDISDSLSNCYG 383
                   SNW P FQLD I++S C++GP FP+WLR QT  M L +  S ISD++ N + 
Sbjct: 471 NSLALKFESNWAPTFQLDRIFLSSCDLGPPFPQWLRNQTNFMELDISGSRISDTIPNWFW 530

Query: 384 NLSS--LETLDLS 416
           NLS+  LE LDLS
Sbjct: 531 NLSNSKLELLDLS 543


>ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|222864898|gb|EEF02029.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   LPNWLYPLKNLEILDLSANHFDGPIPESVGALLRLKELDLSDNLLTGVVSEVHLAXXXXX 182
           +P  +  L +L++LDLS N+ +G +PESVG L  L+ L++ +N L+G+VSE H +     
Sbjct: 371 IPASIGRLSSLKLLDLSHNYLNGSVPESVGQLFNLEFLNIHNNSLSGIVSERHFSKLTSL 430

Query: 183 XXXXXXXXXXXXXIRSNWIPPFQLDFIYMSHCEVGPQFPEWLRTQTTLMVLHMHNSDISD 362
                        +R  W+PPFQ+  + +  C+VGPQFP+WL+TQ  L  L M N+ ISD
Sbjct: 431 TTLYLYLNSLVLDLRPTWVPPFQIRELALFSCKVGPQFPQWLQTQKNLSTLDMSNTSISD 490

Query: 363 SLSNCYGNLSS-LETLDLS 416
            + + + ++SS +  LDLS
Sbjct: 491 RIPDWFESISSNIVLLDLS 509


>ref|XP_002262904.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 1028

 Score =  102 bits (253), Expect = 4e-20
 Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 25/163 (15%)
 Frame = +3

Query: 3   LPNWLYPLKNLEILDLSANHFDGPIP------------------------ESVGALLRLK 110
           LPNWL  LKNL  LDLS N  +GPIP                        +S+G L  L+
Sbjct: 395 LPNWLGELKNLRSLDLSWNKLEGPIPASLWTLQHLESLSIRMNELNGSLLDSIGQLSELQ 454

Query: 111 ELDLSDNLLTGVVSEVHLAXXXXXXXXXXXXXXXXXXIRSNWIPPFQLDFIYMSHCEVGP 290
           ELD+  N L+G +SE H                    +  NW+PPFQ++++ M  C +GP
Sbjct: 455 ELDVGSNQLSGSLSEQHFWKLSKLEFLYMDSNSFRLNVSPNWVPPFQVEYLDMGSCHLGP 514

Query: 291 QFPEWLRTQTTLMVLHMHNSDISDSLSNCYGNLS-SLETLDLS 416
            FP WL++Q  L  L   N+ IS  + N + N+S +L+ L LS
Sbjct: 515 SFPVWLQSQKNLQYLDFSNASISSRIPNWFWNISFNLQYLSLS 557


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