BLASTX nr result
ID: Coptis25_contig00012111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00012111 (737 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm... 89 7e-16 ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2... 78 2e-12 ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2... 77 5e-12 gb|ABK27120.1| unknown [Picea sitchensis] 65 2e-08 ref|NP_001031993.1| uncharacterized protein [Arabidopsis thalian... 64 2e-08 >ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis] gi|223531286|gb|EEF33128.1| conserved hypothetical protein [Ricinus communis] Length = 141 Score = 89.4 bits (220), Expect = 7e-16 Identities = 51/138 (36%), Positives = 66/138 (47%), Gaps = 7/138 (5%) Frame = -1 Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555 WF RRGPEWK +F IVIL +WL +Y DY+ ++ + NF Sbjct: 3 WFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAINF 62 Query: 554 HIFXXXXXXXXXXXVRCLSDNWR-LLRLDQGDSSHQ-----DGCS-PWGVAIXXXXXXVM 396 +F + S NW RL Q S + +G S PWG+A V+ Sbjct: 63 QLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLLVL 122 Query: 395 ISYQSSFHSRWFKPLWRS 342 +SYQSSFHS+WF PLWRS Sbjct: 123 LSYQSSFHSKWFGPLWRS 140 >ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1| predicted protein [Populus trichocarpa] Length = 138 Score = 78.2 bits (191), Expect = 2e-12 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 4/136 (2%) Frame = -1 Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555 WF RRGPEWK +F IVI +WL Y Y ++ + N Sbjct: 3 WFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAVNL 62 Query: 554 HIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSSHQDGCS-PWGVAIXXXXXXVMISY 387 IF + S NW L LR DS+ + S PWG+A+ +++SY Sbjct: 63 QIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLMLLSY 122 Query: 386 QSSFHSRWFKPLWRSY 339 QSSFHS+WF PL S+ Sbjct: 123 QSSFHSKWFGPLRGSH 138 >ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1| predicted protein [Populus trichocarpa] Length = 138 Score = 76.6 bits (187), Expect = 5e-12 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 4/129 (3%) Frame = -1 Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555 WF RRGPEWK +F IVI +WL Y Y+ ++ + N Sbjct: 3 WFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAINL 62 Query: 554 HIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSS-HQDGCSPWGVAIXXXXXXVMISY 387 IF + S NW L LR Q DS G PWG+AI +++SY Sbjct: 63 QIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLMLLSY 122 Query: 386 QSSFHSRWF 360 +S+FHS+WF Sbjct: 123 RSTFHSKWF 131 >gb|ABK27120.1| unknown [Picea sitchensis] Length = 128 Score = 64.7 bits (156), Expect = 2e-08 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 3/98 (3%) Frame = -1 Query: 629 IVILFMWLPKYMDYRTEMEKTENNFHIFXXXXXXXXXXXVRCLSDNWR---LLRLDQGDS 459 IV +++ YM Y + ME T + +F VRCLS L + ++ Sbjct: 30 IVFFLIFISWYMTYESSMEDTRDRLKLFLMISPLLLLLAVRCLSKTGMPTIALPASEPNA 89 Query: 458 SHQDGCSPWGVAIXXXXXXVMISYQSSFHSRWFKPLWR 345 H+ G SPWGV + +MISYQS+FH WF PLWR Sbjct: 90 IHRAGSSPWGVGLLLVVLLLMISYQSTFHDHWF-PLWR 126 >ref|NP_001031993.1| uncharacterized protein [Arabidopsis thaliana] gi|98962135|gb|ABF59397.1| unknown protein [Arabidopsis thaliana] gi|149944379|gb|ABR46232.1| At5g42146 [Arabidopsis thaliana] gi|332007390|gb|AED94773.1| uncharacterized protein [Arabidopsis thaliana] Length = 137 Score = 64.3 bits (155), Expect = 2e-08 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 7/136 (5%) Frame = -1 Query: 737 GWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENN 558 GWF+++RRG WK + AI+ L ++L Y Y+ E+EKT N Sbjct: 2 GWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAAN 61 Query: 557 FHIFXXXXXXXXXXXVRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXXV 399 +F + LS RLL R +Q S +G PWGV + + Sbjct: 62 LKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLL 121 Query: 398 MISYQSSFHSRWFKPL 351 ++S QS FHS W+ L Sbjct: 122 LVSKQSYFHSLWYPNL 137