BLASTX nr result

ID: Coptis25_contig00012111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012111
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    89   7e-16
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
gb|ABK27120.1| unknown [Picea sitchensis]                              65   2e-08
ref|NP_001031993.1| uncharacterized protein [Arabidopsis thalian...    64   2e-08

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 51/138 (36%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = -1

Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555
           WF   RRGPEWK                    +F IVIL +WL +Y DY+ ++  +  NF
Sbjct: 3   WFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAINF 62

Query: 554 HIFXXXXXXXXXXXVRCLSDNWR-LLRLDQGDSSHQ-----DGCS-PWGVAIXXXXXXVM 396
            +F           +   S NW    RL Q  S  +     +G S PWG+A       V+
Sbjct: 63  QLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLLVL 122

Query: 395 ISYQSSFHSRWFKPLWRS 342
           +SYQSSFHS+WF PLWRS
Sbjct: 123 LSYQSSFHSKWFGPLWRS 140


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
 Frame = -1

Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555
           WF   RRGPEWK                    +F IVI  +WL  Y  Y  ++  +  N 
Sbjct: 3   WFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAVNL 62

Query: 554 HIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSSHQDGCS-PWGVAIXXXXXXVMISY 387
            IF           +   S NW L   LR    DS+ +   S PWG+A+      +++SY
Sbjct: 63  QIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLMLLSY 122

Query: 386 QSSFHSRWFKPLWRSY 339
           QSSFHS+WF PL  S+
Sbjct: 123 QSSFHSKWFGPLRGSH 138


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
 Frame = -1

Query: 734 WFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENNF 555
           WF   RRGPEWK                    +F IVI  +WL  Y  Y+ ++  +  N 
Sbjct: 3   WFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAINL 62

Query: 554 HIFXXXXXXXXXXXVRCLSDNWRL---LRLDQGDSS-HQDGCSPWGVAIXXXXXXVMISY 387
            IF           +   S NW L   LR  Q DS     G  PWG+AI      +++SY
Sbjct: 63  QIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLMLLSY 122

Query: 386 QSSFHSRWF 360
           +S+FHS+WF
Sbjct: 123 RSTFHSKWF 131


>gb|ABK27120.1| unknown [Picea sitchensis]
          Length = 128

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
 Frame = -1

Query: 629 IVILFMWLPKYMDYRTEMEKTENNFHIFXXXXXXXXXXXVRCLSDNWR---LLRLDQGDS 459
           IV   +++  YM Y + ME T +   +F           VRCLS        L   + ++
Sbjct: 30  IVFFLIFISWYMTYESSMEDTRDRLKLFLMISPLLLLLAVRCLSKTGMPTIALPASEPNA 89

Query: 458 SHQDGCSPWGVAIXXXXXXVMISYQSSFHSRWFKPLWR 345
            H+ G SPWGV +      +MISYQS+FH  WF PLWR
Sbjct: 90  IHRAGSSPWGVGLLLVVLLLMISYQSTFHDHWF-PLWR 126


>ref|NP_001031993.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98962135|gb|ABF59397.1| unknown protein [Arabidopsis
           thaliana] gi|149944379|gb|ABR46232.1| At5g42146
           [Arabidopsis thaliana] gi|332007390|gb|AED94773.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 137

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
 Frame = -1

Query: 737 GWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYRTEMEKTENN 558
           GWF+++RRG  WK                    + AI+ L ++L  Y  Y+ E+EKT  N
Sbjct: 2   GWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAAN 61

Query: 557 FHIFXXXXXXXXXXXVRCLSDNWRLL-------RLDQGDSSHQDGCSPWGVAIXXXXXXV 399
             +F           +  LS   RLL       R +Q  S   +G  PWGV +      +
Sbjct: 62  LKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLLL 121

Query: 398 MISYQSSFHSRWFKPL 351
           ++S QS FHS W+  L
Sbjct: 122 LVSKQSYFHSLWYPNL 137


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