BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012108
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              263   2e-68
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   263   2e-68
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   258   8e-67
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M...   254   2e-65
ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....   252   4e-65

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  263 bits (673), Expect = 2e-68
 Identities = 127/159 (79%), Positives = 144/159 (90%)
 Frame = +3

Query: 225 SDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIISRDKRDRRDYEQISNLAKR 404
           SDDEY+CDF++ K SSSVANIDEWKWKLSLLSR+EQDQEI+SRDK+DRRDYEQISNLA R
Sbjct: 51  SDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANR 110

Query: 405 MGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLVQEHLDRMQLTS 584
           MGLYSE+YGKV+V SKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGL+QEHLDRM L+S
Sbjct: 111 MGLYSEIYGKVMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSS 170

Query: 585 GKINDNSGDSRVVDQIEDLNPDENPDSFLDRSVMEKVLQ 701
           GK++D S D+      ED+NP++NPDS LD SVMEKVLQ
Sbjct: 171 GKVSDCSDDANGNGGFEDVNPEDNPDSLLDGSVMEKVLQ 209


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  263 bits (673), Expect = 2e-68
 Identities = 127/159 (79%), Positives = 144/159 (90%)
 Frame = +3

Query: 225 SDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIISRDKRDRRDYEQISNLAKR 404
           SDDEY+CDF++ K SSSVANIDEWKWKLSLLSR+EQDQEI+SRDK+DRRDYEQISNLA R
Sbjct: 51  SDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANR 110

Query: 405 MGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLVQEHLDRMQLTS 584
           MGLYSE+YGKV+V SKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGL+QEHLDRM L+S
Sbjct: 111 MGLYSEIYGKVMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSS 170

Query: 585 GKINDNSGDSRVVDQIEDLNPDENPDSFLDRSVMEKVLQ 701
           GK++D S D+      ED+NP++NPDS LD SVMEKVLQ
Sbjct: 171 GKVSDCSDDANGNGGFEDVNPEDNPDSLLDGSVMEKVLQ 209


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  258 bits (659), Expect = 8e-67
 Identities = 122/159 (76%), Positives = 144/159 (90%)
 Frame = +3

Query: 225 SDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIISRDKRDRRDYEQISNLAKR 404
           SDDEY+CDF+NQ+ SS+VAN+DEWKWKLS+L RSE+DQEI+SRD++DRRDYEQI+NLAKR
Sbjct: 76  SDDEYDCDFENQQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKR 135

Query: 405 MGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLVQEHLDRMQLTS 584
           MGLYSEL+GKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGL+QE+LDR+QL S
Sbjct: 136 MGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNS 195

Query: 585 GKINDNSGDSRVVDQIEDLNPDENPDSFLDRSVMEKVLQ 701
            K  D+  D    +Q++D+N DEN DSF+D SVMEKVLQ
Sbjct: 196 AKTTDSLDDVNSTNQVKDINMDENADSFVDESVMEKVLQ 234


>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 279

 Score =  254 bits (648), Expect = 2e-65
 Identities = 122/159 (76%), Positives = 142/159 (89%)
 Frame = +3

Query: 225 SDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIISRDKRDRRDYEQISNLAKR 404
           SDDEYECDF+N + SS+VAN+DEWKWKLS+L R+E+DQEI+SRDKRDRRDYEQI+NLAKR
Sbjct: 62  SDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYEQIANLAKR 121

Query: 405 MGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLVQEHLDRMQLTS 584
           MGLYSEL+GKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGLVQE+LDR+QL S
Sbjct: 122 MGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEYLDRLQLNS 181

Query: 585 GKINDNSGDSRVVDQIEDLNPDENPDSFLDRSVMEKVLQ 701
            K  D+  +    +QI D++ DEN +SF+D SVMEKVLQ
Sbjct: 182 AKTTDSLDNLNSTNQIRDIDMDENANSFVDESVMEKVLQ 220


>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316958|gb|EFH47380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score =  252 bits (644), Expect = 4e-65
 Identities = 125/159 (78%), Positives = 140/159 (88%)
 Frame = +3

Query: 225 SDDEYECDFDNQKGSSSVANIDEWKWKLSLLSRSEQDQEIISRDKRDRRDYEQISNLAKR 404
           SDDEYEC+F+  K SSSVAN+DEWKWKL +L  ++ +QEI+SRDKRDRRDYEQIS+LAKR
Sbjct: 75  SDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRRDYEQISSLAKR 134

Query: 405 MGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLVQEHLDRMQLTS 584
           MGLYSE+YGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGL+QEHLDR QL+S
Sbjct: 135 MGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQEHLDRQQLSS 194

Query: 585 GKINDNSGDSRVVDQIEDLNPDENPDSFLDRSVMEKVLQ 701
           GK N+   DS+   Q E+L PDEN DSFLD SVMEKVLQ
Sbjct: 195 GKANECVADSQPPKQTEEL-PDENSDSFLDGSVMEKVLQ 232