BLASTX nr result

ID: Coptis25_contig00012101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012101
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25257.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002271902.1| PREDICTED: nudix hydrolase 3-like [Vitis vin...   107   2e-21
ref|XP_003543339.1| PREDICTED: nudix hydrolase 3-like [Glycine max]   101   1e-19
ref|XP_002303973.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_002333368.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19

>emb|CBI25257.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/65 (80%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 CKDSWPGLWDISSAGHISADHSSLVTARRXXXXXXXXXLPKDAFELLFVFLQECVINDGK 18
           CKDSWPGLWDISSAGHISA  SSL+TARR         LPKDAFE LFVFLQECVINDGK
Sbjct: 63  CKDSWPGLWDISSAGHISAGDSSLITARRELHEELGVILPKDAFEFLFVFLQECVINDGK 122

Query: 17  FINNE 3
           FINNE
Sbjct: 123 FINNE 127



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 436 EEHFDVLTKTGEKAGITKSRGLVHRDGDYHRAVHV 332
           EEHFDVLTKTG++ G++K RG VHRDGDYH AVHV
Sbjct: 11  EEHFDVLTKTGQRTGLSKPRGDVHRDGDYHAAVHV 45


>ref|XP_002271902.1| PREDICTED: nudix hydrolase 3-like [Vitis vinifera]
          Length = 782

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/65 (80%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 CKDSWPGLWDISSAGHISADHSSLVTARRXXXXXXXXXLPKDAFELLFVFLQECVINDGK 18
           CKDSWPGLWDISSAGHISA  SSL+TARR         LPKDAFE LFVFLQECVINDGK
Sbjct: 60  CKDSWPGLWDISSAGHISAGDSSLITARRELHEELGVILPKDAFEFLFVFLQECVINDGK 119

Query: 17  FINNE 3
           FINNE
Sbjct: 120 FINNE 124



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 436 EEHFDVLTKTGEKAGITKSRGLVHRDGDYHRAVHV 332
           EEHFDVLTKTG++ G++K RG VHRDGDYH AVHV
Sbjct: 8   EEHFDVLTKTGQRTGLSKPRGDVHRDGDYHAAVHV 42


>ref|XP_003543339.1| PREDICTED: nudix hydrolase 3-like [Glycine max]
          Length = 768

 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/65 (75%), Positives = 52/65 (80%)
 Frame = -2

Query: 197 CKDSWPGLWDISSAGHISADHSSLVTARRXXXXXXXXXLPKDAFELLFVFLQECVINDGK 18
           CKDSWP LWDISSAGHISA  SSL +ARR         LPKDAFEL+FVFLQECVINDGK
Sbjct: 57  CKDSWPDLWDISSAGHISAGDSSLTSARRELEEELGITLPKDAFELIFVFLQECVINDGK 116

Query: 17  FINNE 3
           +INNE
Sbjct: 117 YINNE 121



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 439 AEEHFDVLTKTGEKAGITKSRGLVHRDGDYHRAVHV 332
           AEEH DVLTKTG K G++K RG VHRDGDYHRAVHV
Sbjct: 4   AEEHLDVLTKTGLKTGVSKPRGDVHRDGDYHRAVHV 39


>ref|XP_002303973.1| predicted protein [Populus trichocarpa] gi|222841405|gb|EEE78952.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  101 bits (252), Expect = 1e-19
 Identities = 48/65 (73%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 CKDSWPGLWDISSAGHISADHSSLVTARRXXXXXXXXXLPKDAFELLFVFLQECVINDGK 18
           CKDSWPG WDISSAGHISA  SSLV+A+R         LPKDAFEL+F++LQECVINDGK
Sbjct: 87  CKDSWPGQWDISSAGHISAGDSSLVSAQRELQEELGISLPKDAFELIFIYLQECVINDGK 146

Query: 17  FINNE 3
           FINNE
Sbjct: 147 FINNE 151


>ref|XP_002333368.1| predicted protein [Populus trichocarpa] gi|222836350|gb|EEE74757.1|
           predicted protein [Populus trichocarpa]
          Length = 752

 Score =  101 bits (252), Expect = 1e-19
 Identities = 48/65 (73%), Positives = 53/65 (81%)
 Frame = -2

Query: 197 CKDSWPGLWDISSAGHISADHSSLVTARRXXXXXXXXXLPKDAFELLFVFLQECVINDGK 18
           CKDSWPG WDISSAGHISA  SSLV+A+R         LPKDAFEL+F++LQECVINDGK
Sbjct: 36  CKDSWPGQWDISSAGHISAGDSSLVSAQRELQEELGISLPKDAFELIFIYLQECVINDGK 95

Query: 17  FINNE 3
           FINNE
Sbjct: 96  FINNE 100


Top