BLASTX nr result
ID: Coptis25_contig00012098
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00012098 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004162384.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar pro... 62 2e-09 ref|XP_004140003.1| PREDICTED: vacuolar protein sorting-associat... 62 2e-09 ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associat... 61 3e-09 emb|CBI28415.3| unnamed protein product [Vitis vinifera] 61 3e-09 ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 >ref|XP_004162384.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 11 homolog [Cucumis sativus] Length = 957 Score = 62.4 bits (150), Expect(2) = 2e-09 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = +3 Query: 93 KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221 KI+C S GR K+ GCDDG NLLD GLK+ YGFQAH+SS+ F Sbjct: 28 KIQCCSSGRGKVVIGCDDGSVNLLDRGLKFSYGFQAHSSSVSF 70 Score = 24.3 bits (51), Expect(2) = 2e-09 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 34 FVFSEDKSAGKCLIHDEI 87 F F E+K AG+C I +EI Sbjct: 7 FEFFEEKLAGRCTIPEEI 24 >ref|XP_004140003.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Cucumis sativus] Length = 957 Score = 62.4 bits (150), Expect(2) = 2e-09 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = +3 Query: 93 KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221 KI+C S GR K+ GCDDG NLLD GLK+ YGFQAH+SS+ F Sbjct: 28 KIQCCSSGRGKVVIGCDDGSVNLLDRGLKFSYGFQAHSSSVSF 70 Score = 24.3 bits (51), Expect(2) = 2e-09 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 34 FVFSEDKSAGKCLIHDEI 87 F F E+K AG+C I +EI Sbjct: 7 FEFFEEKLAGRCTIPEEI 24 >ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Vitis vinifera] Length = 960 Score = 60.8 bits (146), Expect(2) = 3e-09 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = +3 Query: 93 KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221 KI+C S GR KI GCDDG + LD GLK+ YGFQAH+SS+LF Sbjct: 27 KIECCSSGRGKIVLGCDDGTVSFLDRGLKFNYGFQAHSSSVLF 69 Score = 25.0 bits (53), Expect(2) = 3e-09 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 34 FVFSEDKSAGKCLIHDEIS 90 F F E+K AGKC I +E++ Sbjct: 7 FEFFEEKLAGKCSIPEEVA 25 >emb|CBI28415.3| unnamed protein product [Vitis vinifera] Length = 913 Score = 60.8 bits (146), Expect(2) = 3e-09 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = +3 Query: 93 KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221 KI+C S GR KI GCDDG + LD GLK+ YGFQAH+SS+LF Sbjct: 27 KIECCSSGRGKIVLGCDDGTVSFLDRGLKFNYGFQAHSSSVLF 69 Score = 25.0 bits (53), Expect(2) = 3e-09 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +1 Query: 34 FVFSEDKSAGKCLIHDEIS 90 F F E+K AGKC I +E++ Sbjct: 7 FEFFEEKLAGKCSIPEEVA 25 >ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|222861962|gb|EEE99504.1| predicted protein [Populus trichocarpa] Length = 962 Score = 57.4 bits (137), Expect = 1e-06 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = +3 Query: 93 KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221 KI+C S GR K+ GCDDG +LLD GLK+ + FQ+H+SS+LF Sbjct: 28 KIECCSSGRGKVVIGCDDGTVSLLDRGLKFNFSFQSHSSSVLF 70