BLASTX nr result

ID: Coptis25_contig00012098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012098
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162384.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar pro...    62   2e-09
ref|XP_004140003.1| PREDICTED: vacuolar protein sorting-associat...    62   2e-09
ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associat...    61   3e-09
emb|CBI28415.3| unnamed protein product [Vitis vinifera]               61   3e-09
ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_004162384.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated
           protein 11 homolog [Cucumis sativus]
          Length = 957

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 93  KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221
           KI+C S GR K+  GCDDG  NLLD GLK+ YGFQAH+SS+ F
Sbjct: 28  KIQCCSSGRGKVVIGCDDGSVNLLDRGLKFSYGFQAHSSSVSF 70



 Score = 24.3 bits (51), Expect(2) = 2e-09
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 34 FVFSEDKSAGKCLIHDEI 87
          F F E+K AG+C I +EI
Sbjct: 7  FEFFEEKLAGRCTIPEEI 24


>ref|XP_004140003.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog
           [Cucumis sativus]
          Length = 957

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 93  KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221
           KI+C S GR K+  GCDDG  NLLD GLK+ YGFQAH+SS+ F
Sbjct: 28  KIQCCSSGRGKVVIGCDDGSVNLLDRGLKFSYGFQAHSSSVSF 70



 Score = 24.3 bits (51), Expect(2) = 2e-09
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 34 FVFSEDKSAGKCLIHDEI 87
          F F E+K AG+C I +EI
Sbjct: 7  FEFFEEKLAGRCTIPEEI 24


>ref|XP_002272218.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog
           [Vitis vinifera]
          Length = 960

 Score = 60.8 bits (146), Expect(2) = 3e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 93  KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221
           KI+C S GR KI  GCDDG  + LD GLK+ YGFQAH+SS+LF
Sbjct: 27  KIECCSSGRGKIVLGCDDGTVSFLDRGLKFNYGFQAHSSSVLF 69



 Score = 25.0 bits (53), Expect(2) = 3e-09
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 34 FVFSEDKSAGKCLIHDEIS 90
          F F E+K AGKC I +E++
Sbjct: 7  FEFFEEKLAGKCSIPEEVA 25


>emb|CBI28415.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score = 60.8 bits (146), Expect(2) = 3e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 93  KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221
           KI+C S GR KI  GCDDG  + LD GLK+ YGFQAH+SS+LF
Sbjct: 27  KIECCSSGRGKIVLGCDDGTVSFLDRGLKFNYGFQAHSSSVLF 69



 Score = 25.0 bits (53), Expect(2) = 3e-09
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 34 FVFSEDKSAGKCLIHDEIS 90
          F F E+K AGKC I +E++
Sbjct: 7  FEFFEEKLAGKCSIPEEVA 25


>ref|XP_002321189.1| predicted protein [Populus trichocarpa] gi|222861962|gb|EEE99504.1|
           predicted protein [Populus trichocarpa]
          Length = 962

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +3

Query: 93  KIKCSSRGREKISDGCDDGMANLLDCGLKYVYGFQAHTSSILF 221
           KI+C S GR K+  GCDDG  +LLD GLK+ + FQ+H+SS+LF
Sbjct: 28  KIECCSSGRGKVVIGCDDGTVSLLDRGLKFNFSFQSHSSSVLF 70


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