BLASTX nr result

ID: Coptis25_contig00012083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012083
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567847.1| PREDICTED: uncharacterized protein LOC100832...    64   2e-20
gb|EEE64774.1| hypothetical protein OsJ_19630 [Oryza sativa Japo...    62   9e-20
gb|EEC79738.1| hypothetical protein OsI_21078 [Oryza sativa Indi...    62   9e-20
ref|XP_003569465.1| PREDICTED: uncharacterized protein LOC100834...    64   3e-19
ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP...    62   6e-18

>ref|XP_003567847.1| PREDICTED: uncharacterized protein LOC100832861 [Brachypodium
           distachyon]
          Length = 604

 Score = 63.9 bits (154), Expect(2) = 2e-20
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = -3

Query: 643 YKKLEQSVCALLRTRDMPISRYREFGIPVDWLQDSGVVGKIKLSSVQLARKYM 485
           ++KLE  V +L R RD  +SRYR + IP +W+QD+G++ +IK+ SV+LARKY+
Sbjct: 478 FEKLEHGVYSLARVRDGAMSRYRGYQIPFEWMQDTGIISQIKIQSVKLARKYL 530



 Score = 61.2 bits (147), Expect(2) = 2e-20
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -2

Query: 803 VDDRYVLKHFDWHH----AMREASYEYQDLMKLGKRATSFVDDPKLPCEVNMKKMYSL*E 636
           VD+R VLKHFDW      A+REA++ Y+DL K+   A +F DDP+ PC   +KKM +L E
Sbjct: 420 VDERAVLKHFDWPEKKADALREAAFGYRDLKKVETEAAAFCDDPRQPCSSALKKMQALFE 479


>gb|EEE64774.1| hypothetical protein OsJ_19630 [Oryza sativa Japonica Group]
          Length = 653

 Score = 62.4 bits (150), Expect(2) = 9e-20
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -2

Query: 803 VDDRYVLKHFDWHH----AMREASYEYQDLMKLGKRATSFVDDPKLPCEVNMKKMYSL*E 636
           VD+R VLKHF+W      A+REA++ Y+DL K+ + A+SF DDP+ PC   +KKM +L E
Sbjct: 468 VDERAVLKHFEWPEQKADALREAAFGYRDLKKIEEEASSFCDDPRQPCSSALKKMQALFE 527



 Score = 60.8 bits (146), Expect(2) = 9e-20
 Identities = 27/53 (50%), Positives = 40/53 (75%)
 Frame = -3

Query: 643 YKKLEQSVCALLRTRDMPISRYREFGIPVDWLQDSGVVGKIKLSSVQLARKYM 485
           ++KLE  V +L R RD  ++RYR + IP +W+QD+G+V +IKL SV+LA KY+
Sbjct: 526 FEKLEHGVYSLARVRDGAMNRYRGYHIPWEWMQDTGIVSQIKLQSVKLAMKYL 578


>gb|EEC79738.1| hypothetical protein OsI_21078 [Oryza sativa Indica Group]
          Length = 495

 Score = 62.4 bits (150), Expect(2) = 9e-20
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -2

Query: 803 VDDRYVLKHFDWHH----AMREASYEYQDLMKLGKRATSFVDDPKLPCEVNMKKMYSL*E 636
           VD+R VLKHF+W      A+REA++ Y+DL K+ + A+SF DDP+ PC   +KKM +L E
Sbjct: 310 VDERAVLKHFEWPEQKADALREAAFGYRDLKKIEEEASSFCDDPRQPCSSALKKMQALFE 369



 Score = 60.8 bits (146), Expect(2) = 9e-20
 Identities = 27/53 (50%), Positives = 40/53 (75%)
 Frame = -3

Query: 643 YKKLEQSVCALLRTRDMPISRYREFGIPVDWLQDSGVVGKIKLSSVQLARKYM 485
           ++KLE  V +L R RD  ++RYR + IP +W+QD+G+V +IKL SV+LA KY+
Sbjct: 368 FEKLEHGVYSLARVRDGAMNRYRGYHIPWEWMQDTGIVSQIKLQSVKLAMKYL 420


>ref|XP_003569465.1| PREDICTED: uncharacterized protein LOC100834196 [Brachypodium
           distachyon]
          Length = 623

 Score = 63.9 bits (154), Expect(2) = 3e-19
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
 Frame = -3

Query: 643 YKKLEQSVCALLRTRDMPISRYREFGIPVDWLQDSGVVGKIKLSSVQLARKYM------I 482
           ++KLE  V  L R RD   SRY  F IP DW+QD+G+V +IKL SV+LARKY+      +
Sbjct: 496 FEKLEHGVYNLARGRDGATSRYSRFQIPWDWMQDTGIVSQIKLQSVKLARKYLERVSSEL 555

Query: 481 HEIRIGSRENPM 446
             I++G  E  +
Sbjct: 556 EAIKVGPAEEEL 567



 Score = 57.8 bits (138), Expect(2) = 3e-19
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
 Frame = -2

Query: 803 VDDRYVLKHFDWHH----AMREASYEYQDLMKLGKRATSFVDDPKLPCEVNMKKMYSL*E 636
           VD+R VLKHF+W      A+REA++ Y DL KL   A+SF DD + PC   +KKM +L E
Sbjct: 438 VDERAVLKHFEWPEQKADALREAAFGYCDLKKLEVEASSFRDDARQPCAAELKKMQALFE 497


>ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
           [Cucumis sativus]
          Length = 787

 Score = 62.0 bits (149), Expect(2) = 6e-18
 Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = -2

Query: 803 VDDRYVLKHFDWHH----AMREASYEYQDLMKLGKRATSFVDDPKLPCEVNMKKMYSL*E 636
           VD+R VLKHFDW       +REA++ Y+DL KL    +++ DDP+LPC++ +KKM +L E
Sbjct: 616 VDERAVLKHFDWPERKADTLREAAFGYRDLKKLECEISAYKDDPRLPCDIALKKMVALSE 675



 Score = 55.1 bits (131), Expect(2) = 6e-18
 Identities = 25/52 (48%), Positives = 37/52 (71%)
 Frame = -3

Query: 640 KKLEQSVCALLRTRDMPISRYREFGIPVDWLQDSGVVGKIKLSSVQLARKYM 485
           +K+E+S   LLR R+  +   +EF IP DW+ D+G++ KIKL SV+LA+ YM
Sbjct: 675 EKMERSSYNLLRMRESLMRNCKEFQIPTDWMLDNGIISKIKLGSVKLAKMYM 726


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