BLASTX nr result

ID: Coptis25_contig00012068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012068
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Viti...   306   e-104
emb|CBY88798.1| myb transcription factor [Humulus lupulus]            306   e-102
ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like ...   308   3e-81
ref|XP_004147257.1| PREDICTED: transcription factor MYB1R1-like ...   308   3e-81
gb|AAB32591.2| MybSt1 [Solanum tuberosum]                             308   3e-81

>ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Vitis vinifera]
          Length = 335

 Score =  306 bits (785), Expect(2) = e-104
 Identities = 170/277 (61%), Positives = 186/277 (67%)
 Frame = +1

Query: 421  SSSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGD 600
            S SPG+TPEHG   D  GYASE FV GSSSS RERKKG PWTEEEHRMFLLGLQKLGKGD
Sbjct: 64   SVSPGETPEHGAAAD--GYASEGFVPGSSSS-RERKKGTPWTEEEHRMFLLGLQKLGKGD 120

Query: 601  WRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQVDTPQVLAQDLF 780
            WRGI+RNYVISRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE VDTP V ++D F
Sbjct: 121  WRGISRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADESVDTPMV-SRDFF 179

Query: 781  PISHLQAETPGNPSLAATPAIDEECESMDSTNSNDGEAGLPNPESSQCSYXXXXXXXXXX 960
              +  QAET  N  L   PA+DEECESMDSTNSNDGE  +P P+  Q             
Sbjct: 180  STNPSQAETLSNNPLPVPPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSP 239

Query: 961  XXXXXXXXXXGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXXXXXXXXXXXXX 1140
                      G ++EP   E HEV+KPTAVHSKSPINVDELVGMSK              
Sbjct: 240  FFPFSFPFWPGNSSEPTKMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSS 299

Query: 1141 XXXRKLVEGTARQSAFHVNPXXXXXXXXXXXXXIHAV 1251
                KL+EG++RQSAFH NP             IHAV
Sbjct: 300  LTL-KLLEGSSRQSAFHANPASGSSSMNSSGSPIHAV 335



 Score = 99.0 bits (245), Expect(2) = e-104
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +3

Query: 162 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY 302
           MTRRCSHCS+NGHNSRTCPNRGVK+FGVRLTDG IRKSASMGNLSHY
Sbjct: 1   MTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGLIRKSASMGNLSHY 47


>emb|CBY88798.1| myb transcription factor [Humulus lupulus]
          Length = 336

 Score =  306 bits (783), Expect(2) = e-102
 Identities = 168/281 (59%), Positives = 187/281 (66%), Gaps = 2/281 (0%)
 Frame = +1

Query: 415  HLSSSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGK 594
            ++  SPGDTP+HG   D  GYASEDFV GSSSSCRERKKGVPWTEEEHRMFLLGLQKLGK
Sbjct: 60   NVPGSPGDTPDHGAAAD--GYASEDFVPGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGK 117

Query: 595  GDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQVDTPQVLAQD 774
            GDWRGIARNYVISRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE  D   V  +D
Sbjct: 118  GDWRGIARNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIIADESADASMV-PRD 176

Query: 775  LFPISHLQAETPGNPSLAATPAIDEECESMDSTNSNDGEAGLPN-PESSQCSYXXXXXXX 951
               ++H Q E   + +L   PA+DEECESMDSTNSNDGE  LP    SSQ  Y       
Sbjct: 177  FLSVNHPQPEIQSDNTLPDPPALDEECESMDSTNSNDGEPALPQLDNSSQSCYPVIYPAY 236

Query: 952  XXXXXXXXXXXXXGYTTEPMI-QEAHEVVKPTAVHSKSPINVDELVGMSKXXXXXXXXXX 1128
                         GY  +  + +E HEV+KPTAVHSKSPINVDELVGMSK          
Sbjct: 237  ISPFFPFPVPMWSGYDNDTEVNKETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHD 296

Query: 1129 XXXXXXXRKLVEGTARQSAFHVNPXXXXXXXXXXXXXIHAV 1251
                    KL++G++RQSAFH NP             IHAV
Sbjct: 297  GPSPLSL-KLLDGSSRQSAFHANPGSSSSNMNSSGSPIHAV 336



 Score = 93.2 bits (230), Expect(2) = e-102
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +3

Query: 162 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY 302
           MTRRCS+C +NGHNSRTCPNRGVKL GVRLTDGSIRKSASMGN SHY
Sbjct: 1   MTRRCSYCCHNGHNSRTCPNRGVKLSGVRLTDGSIRKSASMGNFSHY 47


>ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]
          Length = 335

 Score =  308 bits (789), Expect = 3e-81
 Identities = 164/277 (59%), Positives = 186/277 (67%), Gaps = 1/277 (0%)
 Frame = +1

Query: 424  SSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW 603
            +SPG+TPEHGV  D  GYASEDFV GSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW
Sbjct: 63   ASPGETPEHGVAAD--GYASEDFVPGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW 120

Query: 604  RGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQVDTPQVLAQDLFP 783
            RGIARNYV+SRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE+V+   ++ QD   
Sbjct: 121  RGIARNYVVSRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADERVEN-SIVQQDFLS 179

Query: 784  ISHLQAETPGNPSLAATP-AIDEECESMDSTNSNDGEAGLPNPESSQCSYXXXXXXXXXX 960
             +   AE+  N  L   P  +DEECESMDSTNSNDGE     P+  QC Y          
Sbjct: 180  ANSSHAESQSNNPLPTPPTTVDEECESMDSTNSNDGETAPAEPDGPQCCYPVVYPAYVAP 239

Query: 961  XXXXXXXXXXGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXXXXXXXXXXXXX 1140
                      GY+ E   +E HEV+KPTAVHSKSP+NVDEL+GMSK              
Sbjct: 240  FFPFSIPFYSGYSAETTNKETHEVLKPTAVHSKSPLNVDELIGMSKLSLGESIGHSGPSS 299

Query: 1141 XXXRKLVEGTARQSAFHVNPXXXXXXXXXXXXXIHAV 1251
                KL+EG++R+SAFH NP             IHAV
Sbjct: 300  LSL-KLLEGSSRRSAFHANPASGSENMSSGGSPIHAV 335



 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +3

Query: 162 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY 302
           MTRRCSHCS+NGHNSRTCPNR VKLFGVRLTDGSIRKSASMGNL+HY
Sbjct: 1   MTRRCSHCSHNGHNSRTCPNRVVKLFGVRLTDGSIRKSASMGNLNHY 47


>ref|XP_004147257.1| PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]
          Length = 336

 Score =  308 bits (789), Expect = 3e-81
 Identities = 164/277 (59%), Positives = 186/277 (67%), Gaps = 1/277 (0%)
 Frame = +1

Query: 424  SSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW 603
            +SPG+TPEHGV  D  GYASEDFV GSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW
Sbjct: 64   ASPGETPEHGVAAD--GYASEDFVPGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDW 121

Query: 604  RGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQVDTPQVLAQDLFP 783
            RGIARNYV+SRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE+V+   ++ QD   
Sbjct: 122  RGIARNYVVSRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADERVEN-SIVQQDFLS 180

Query: 784  ISHLQAETPGNPSLAATP-AIDEECESMDSTNSNDGEAGLPNPESSQCSYXXXXXXXXXX 960
             +   AE+  N  L   P  +DEECESMDSTNSNDGE     P+  QC Y          
Sbjct: 181  ANSSHAESQSNNPLPTPPTTVDEECESMDSTNSNDGETAPAEPDGPQCCYPVVYPAYVAP 240

Query: 961  XXXXXXXXXXGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXXXXXXXXXXXXX 1140
                      GY+ E   +E HEV+KPTAVHSKSP+NVDEL+GMSK              
Sbjct: 241  FFPFSIPFYSGYSAETTNKETHEVLKPTAVHSKSPLNVDELIGMSKLSLGESIGHSGPSS 300

Query: 1141 XXXRKLVEGTARQSAFHVNPXXXXXXXXXXXXXIHAV 1251
                KL+EG++R+SAFH NP             IHAV
Sbjct: 301  LSL-KLLEGSSRRSAFHANPASGSENMSSGGSPIHAV 336



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 183 CSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY 302
           CS+NGHNSRTCPNR VKLFGVRLTDGSIRKSASMGNL+HY
Sbjct: 9   CSHNGHNSRTCPNRVVKLFGVRLTDGSIRKSASMGNLNHY 48


>gb|AAB32591.2| MybSt1 [Solanum tuberosum]
          Length = 342

 Score =  308 bits (789), Expect = 3e-81
 Identities = 174/280 (62%), Positives = 184/280 (65%), Gaps = 5/280 (1%)
 Frame = +1

Query: 427  SPGDTPEHGV--GGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGD 600
            SPGDTP+H    GG   GYASEDFV GSSSS RERKKGVPWTEEEHRMFLLGLQKLGKGD
Sbjct: 65   SPGDTPDHPAVGGGSADGYASEDFVAGSSSS-RERKKGVPWTEEEHRMFLLGLQKLGKGD 123

Query: 601  WRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQVDTPQVLAQDLF 780
            WRGIARNYVISRTPTQVASHAQK+FIRQ+NMSRRKRRSSLFDI ADE  DTP V ++D  
Sbjct: 124  WRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADESGDTPMV-SRDFL 182

Query: 781  PISHLQAETPGNPSLAATPAIDEECESMD---STNSNDGEAGLPNPESSQCSYXXXXXXX 951
                 QAE   N  L  TPA+DEECESM    S NS DGE  LP PESSQ  +       
Sbjct: 183  ADDPAQAEMQSNNLLPPTPAVDEECESMGSAASANSIDGEHALPIPESSQYQHPLVYPAY 242

Query: 952  XXXXXXXXXXXXXGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXXXXXXXXXX 1131
                         GYT EP I E HEV+KP AVHSKSPINVDELVGMSK           
Sbjct: 243  VAPFYPMPYPCWPGYTAEPAIAETHEVLKPIAVHSKSPINVDELVGMSKLSLGESIGDAA 302

Query: 1132 XXXXXXRKLVEGTARQSAFHVNPXXXXXXXXXXXXXIHAV 1251
                   KLVEG++RQSAFH NP             IHAV
Sbjct: 303  KPPSLSLKLVEGSSRQSAFHANPSSGSSGMNSSHNPIHAV 342



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +3

Query: 162 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY 302
           MTRRCSHCS NGHNSRTCPNRGVKLFGVRLTDG IRKSASMGNL+H+
Sbjct: 1   MTRRCSHCSTNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHF 47


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