BLASTX nr result

ID: Coptis25_contig00012066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012066
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus...   108   4e-22
ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot...   108   4e-22
emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]   108   4e-22
ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetas...   106   2e-21
ref|NP_001240878.1| uncharacterized protein LOC100809851 [Glycin...   106   2e-21

>ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis]
           gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 391

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -1

Query: 394 VTFSGHDEKPEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 215
           V+FSG D KPEDVLNPKKKQLEKITP+L TDD+GVATFKGIPFMTS GPCTSSIP ASIK
Sbjct: 332 VSFSGFDGKPEDVLNPKKKQLEKITPNLFTDDKGVATFKGIPFMTSGGPCTSSIPKASIK 391


>ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like
           [Vitis vinifera] gi|297736480|emb|CBI25351.3| unnamed
           protein product [Vitis vinifera]
          Length = 392

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -1

Query: 394 VTFSGHDEKPEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 215
           V+FSG++ KPEDVLNPKKKQLEKITPHL TDD+GVATFKGIPFMTS GPCT SIP ASIK
Sbjct: 333 VSFSGNEGKPEDVLNPKKKQLEKITPHLFTDDKGVATFKGIPFMTSGGPCTCSIPKASIK 392


>emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]
          Length = 523

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -1

Query: 394 VTFSGHDEKPEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 215
           V+FSG++ KPEDVLNPKKKQLEKITPHL TDD+GVATFKGIPFMTS GPCT SIP ASIK
Sbjct: 464 VSFSGNEGKPEDVLNPKKKQLEKITPHLFTDDKGVATFKGIPFMTSGGPCTCSIPKASIK 523


>ref|XP_003526802.1| PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max]
          Length = 390

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -1

Query: 394 VTFSGHDEKPEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 215
           ++FSG D KPEDVLNPKKKQL+KITPHL TDD+GVAT+KGIPFMTS GPCTSSIP A+IK
Sbjct: 331 ISFSGIDGKPEDVLNPKKKQLDKITPHLFTDDKGVATYKGIPFMTSGGPCTSSIPRATIK 390


>ref|NP_001240878.1| uncharacterized protein LOC100809851 [Glycine max]
           gi|255636276|gb|ACU18478.1| unknown [Glycine max]
          Length = 389

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -1

Query: 394 VTFSGHDEKPEDVLNPKKKQLEKITPHLHTDDQGVATFKGIPFMTSAGPCTSSIPNASIK 215
           ++FSG D KPEDVLNPKKKQLEKITPHL TDD+GVAT+KGIPFMTS GPCTSSIP A+I+
Sbjct: 330 ISFSGIDGKPEDVLNPKKKQLEKITPHLFTDDKGVATYKGIPFMTSGGPCTSSIPRATIR 389


Top