BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012065
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   191   2e-46
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   190   3e-46
emb|CBI24846.3| unnamed protein product [Vitis vinifera]              189   4e-46
ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...   189   4e-46
sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   186   6e-45

>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  191 bits (485), Expect = 2e-46
 Identities = 101/133 (75%), Positives = 107/133 (80%)
 Frame = -3

Query: 784 ILAGRFQGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXX 605
           ILAGRF+GKRVVFL QLSSGLLLVTGPFKINGVPLRRVNQSYVI TSTKVDISG+N +  
Sbjct: 95  ILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNADKF 154

Query: 604 XXXXXXXXXXXXXXXXXGEFLEADKEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYL 425
                            GEF EA+KEEKNVLPQEKKDDQK +DA LIKSIEGVPELK YL
Sbjct: 155 DDKYFAKQAEKRKKKGEGEFFEAEKEEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYL 214

Query: 424 AARFSLKSGMKPH 386
           AARFSLK+GMKPH
Sbjct: 215 AARFSLKAGMKPH 227


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  190 bits (482), Expect = 3e-46
 Identities = 99/133 (74%), Positives = 107/133 (80%)
 Frame = -3

Query: 784 ILAGRFQGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXX 605
           ILAGRF+GKRVVFL QLSSGLLL+TGPFKINGVPLRRVNQSYVI TSTKVDISG+N++  
Sbjct: 97  ILAGRFKGKRVVFLKQLSSGLLLITGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKF 156

Query: 604 XXXXXXXXXXXXXXXXXGEFLEADKEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYL 425
                            GEF EA+K+EKNVLPQEKKDDQK VDA LIKSIE VPELK YL
Sbjct: 157 DDKFFAKQAEKKKKKGEGEFFEAEKDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYL 216

Query: 424 AARFSLKSGMKPH 386
           AARFSLK+GMKPH
Sbjct: 217 AARFSLKAGMKPH 229


>emb|CBI24846.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  189 bits (481), Expect = 4e-46
 Identities = 99/133 (74%), Positives = 107/133 (80%)
 Frame = -3

Query: 784 ILAGRFQGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXX 605
           ILAGRF+GKRVVFL QL SGLLLVTGPFKINGVPLRRVNQ+Y+I TSTKVDISG+N+E  
Sbjct: 70  ILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYIIATSTKVDISGVNVEKF 129

Query: 604 XXXXXXXXXXXXXXXXXGEFLEADKEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYL 425
                            GEF EADKEEK+VLPQEKKDDQKAVD  LIKSIEGVP+LKTYL
Sbjct: 130 DDKYFAKETQKKKKKGEGEFFEADKEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYL 189

Query: 424 AARFSLKSGMKPH 386
            ARFSLK+GMKPH
Sbjct: 190 GARFSLKAGMKPH 202


>ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 233

 Score =  189 bits (481), Expect = 4e-46
 Identities = 99/133 (74%), Positives = 107/133 (80%)
 Frame = -3

Query: 784 ILAGRFQGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXX 605
           ILAGRF+GKRVVFL QL SGLLLVTGPFKINGVPLRRVNQ+Y+I TSTKVDISG+N+E  
Sbjct: 97  ILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYIIATSTKVDISGVNVEKF 156

Query: 604 XXXXXXXXXXXXXXXXXGEFLEADKEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYL 425
                            GEF EADKEEK+VLPQEKKDDQKAVD  LIKSIEGVP+LKTYL
Sbjct: 157 DDKYFAKETQKKKKKGEGEFFEADKEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYL 216

Query: 424 AARFSLKSGMKPH 386
            ARFSLK+GMKPH
Sbjct: 217 GARFSLKAGMKPH 229


>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  186 bits (471), Expect = 6e-45
 Identities = 96/133 (72%), Positives = 106/133 (79%)
 Frame = -3

Query: 784 ILAGRFQGKRVVFLNQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXX 605
           ILAGRF+GKRVVFL QLSSGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDISG+N+E  
Sbjct: 98  ILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKF 157

Query: 604 XXXXXXXXXXXXXXXXXGEFLEADKEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYL 425
                            GEF EA+K+E NVLPQEKKDDQKAVD  L+K+IEGVPELK YL
Sbjct: 158 DDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYL 217

Query: 424 AARFSLKSGMKPH 386
            ARFSLK+GMKPH
Sbjct: 218 GARFSLKAGMKPH 230