BLASTX nr result

ID: Coptis25_contig00012057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012057
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36665.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]   100   2e-19
ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    92   4e-17
ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    91   1e-16
ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    91   2e-16

>emb|CBI36665.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = -1

Query: 349 DDTSGNERVDFAPVHGLAMKIVPSEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRR 170
           D   GN+ +    +  L + + P EP VGMEFESA+DAR+ Y+ YGRR GFTIR N+ RR
Sbjct: 53  DSLDGNDDMVQQSIDNLPVSLEPLEPCVGMEFESAEDAREFYEMYGRRMGFTIRNNRTRR 112

Query: 169 SDRDREAIGFSYVCSKEGFRRQRHLTEGRKIRLSKQ-PRVGCKAMLIIVYRRDMEKW 2
           S +D   IG  +VCSKEGFR +++     +I  S+   R GC AML I   +D  KW
Sbjct: 113 SLKDNSIIGREFVCSKEGFRVEKYANREHRILPSRPITREGCNAMLRIA-AKDEGKW 168


>emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]
          Length = 439

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = -1

Query: 349 DDTSGNERVDFAPVHGLAMKIVPSEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRR 170
           D   GN+ +    +  L + + P EP VGMEFESA+DAR+ Y+ YGRR GFTIR N+ RR
Sbjct: 227 DSLDGNDDMVQQSIDNLPVSLEPLEPCVGMEFESAEDAREFYEMYGRRMGFTIRNNRTRR 286

Query: 169 SDRDREAIGFSYVCSKEGFRRQRHLTEGRKIRLSKQ-PRVGCKAMLIIVYRRDMEKW 2
           S +D   IG  +VCSKEGFR +++     +I  S+   R GC AML I   +D  KW
Sbjct: 287 SLKDNSIIGREFVCSKEGFRVEKYANREHRILPSRPITREGCNAMLRIA-AKDEGKW 342



 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 42/101 (41%), Positives = 53/101 (52%)
 Frame = -1

Query: 304 GLAMKIVPSEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCS 125
           GL       EPY G+ FES + AR  Y+EY RR GF  R+   R+S+RD   I     C+
Sbjct: 21  GLCEVDTNQEPYEGLLFESEEAARAFYEEYARRVGFLTRIISSRKSERDGSIISRRLACN 80

Query: 124 KEGFRRQRHLTEGRKIRLSKQPRVGCKAMLIIVYRRDMEKW 2
           KEGF      T   +IR  +  R GC AM I+V R  + KW
Sbjct: 81  KEGFNLNSQKTGRVRIRKRESKREGCMAM-ILVKREKLGKW 120


>ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 259

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
 Frame = -1

Query: 445 MANTSDIGSELMDRDLSVE---NGSSEEVDTVGECDDTSGNERVDFA--PVHGLAMKIVP 281
           M + S  G +  D DL ++   +   E+VD   +  +  G E   F   PV  ++  I  
Sbjct: 1   MDHQSGQGFDSDDSDLDMQAEISDKHEKVDEFSKNLEICGGEDEMFVEQPVADISTDIEA 60

Query: 280 SEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQR 101
            EP++GMEF S ++AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR ++
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 100 HLTEGRKIRLSKQP---RVGCKAMLIIVYRRDMEKW 2
           +L   RK R+   P   R GC+AM+ +   RD  KW
Sbjct: 121 YL--HRKDRVLPPPPATREGCQAMIRLAL-RDRGKW 153


>ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
           gi|449521695|ref|XP_004167865.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
          Length = 255

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
 Frame = -1

Query: 430 DIGSELMDRDLSVENGSSEEVDTVGECDDTSGNERVDFAPVHGLAMKIVPSEPYVGMEFE 251
           DI +E+ ++  S+++    ++D     DD    + V   P+ G+       EPY+GMEF 
Sbjct: 17  DIQTEIYEKGGSIDD-IRNDLDFCLRDDDKVAEQSVVDLPMDGV-------EPYIGMEFS 68

Query: 250 SADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQRHLTEGRKIRL 71
           S D+AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR ++++   RK R+
Sbjct: 69  SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVC--RKDRI 126

Query: 70  SKQP---RVGCKAMLIIVYRRDMEKW 2
              P   R GC+AM+ +   RD  KW
Sbjct: 127 LPAPPITREGCQAMMRLAL-RDGGKW 151


>ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 790

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 13/155 (8%)
 Frame = -1

Query: 427 IGSELMDRDLSVENGSSEEVDTVGECDDTSGNERVDFAPVHG---LAMKIVPS------- 278
           +  E+++ D+ +  G    +DT    +D      +D +P      LA  + P        
Sbjct: 8   LSDEVIEFDM-IGLGDDAAIDTEHPVEDDEDLVNIDNSPATAFTVLAAGLGPHIAGGDTN 66

Query: 277 -EPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFR--R 107
            EP  GMEFES + A+  Y+ Y RR GF+ RV+  RRS RD   I  S+VC+KEGFR  R
Sbjct: 67  LEPCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVER 126

Query: 106 QRHLTEGRKIRLSKQPRVGCKAMLIIVYRRDMEKW 2
           ++HL +GR  R   + RVGCKAML++   +D  +W
Sbjct: 127 EKHLVDGRVKRPRAETRVGCKAMLVVKI-QDSGRW 160


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