BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012052
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...   248   1e-63
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   246   3e-63
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop...   242   7e-62
ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 k...   241   1e-61
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu...   239   6e-61

>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score =  248 bits (633), Expect = 1e-63
 Identities = 119/171 (69%), Positives = 139/171 (81%)
 Frame = -3

Query: 829 DPFGDANLIGDPYCILFLGRLSRLTNEHTLGKAMSKYGKVKNLRLVRHIVTGASCGYAFV 650
           DPFGD  +IGDPYC +F+G L+ LT E TL KAMSK+G+VK+LRLVRHIVTGAS GYAFV
Sbjct: 48  DPFGDPKVIGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFV 107

Query: 649 EFQSQREMRRAYQDAHHSIIDDIEIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGG 470
           E++++REMRRAY+DAHHS+IDD EIIVDYNRQQLMPGWIP          KESGQLRFGG
Sbjct: 108 EYETEREMRRAYEDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGG 167

Query: 469 RERPFRAPLRPIPYDDLKRLGISPPPEGRYLTRFEDXXXXXXXXXSVDKDE 317
           RERPFRAPLRPIP DDLKRLGI PPPEGRY++RF+          ++D++E
Sbjct: 168 RERPFRAPLRPIPLDDLKRLGIPPPPEGRYMSRFQVPPPPRRKRSNMDREE 218


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  246 bits (629), Expect = 3e-63
 Identities = 123/171 (71%), Positives = 134/171 (78%)
 Frame = -3

Query: 829 DPFGDANLIGDPYCILFLGRLSRLTNEHTLGKAMSKYGKVKNLRLVRHIVTGASCGYAFV 650
           DPFGD   IGDPYC +F+GRLS LT E TL KAMSKYGKVKNLRLVRHIVTGAS GYAFV
Sbjct: 48  DPFGDPKAIGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFV 107

Query: 649 EFQSQREMRRAYQDAHHSIIDDIEIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGG 470
           EF+++REMRRAY+D  HS IDD EIIVDYNRQQLMPGWIP          KESGQLRFGG
Sbjct: 108 EFETEREMRRAYKDGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGG 167

Query: 469 RERPFRAPLRPIPYDDLKRLGISPPPEGRYLTRFEDXXXXXXXXXSVDKDE 317
           RERPFRAPL+ IPYDDLKRLGI PPPEGRY++ +E          S DK+E
Sbjct: 168 RERPFRAPLQTIPYDDLKRLGIPPPPEGRYMSHYEVPSPPRRKRSSRDKEE 218


>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
           protein-like [Cucumis sativus]
           gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
           small nuclear ribonucleoprotein 35 kDa protein-like
           [Cucumis sativus]
          Length = 333

 Score =  242 bits (618), Expect = 7e-62
 Identities = 115/155 (74%), Positives = 132/155 (85%)
 Frame = -3

Query: 829 DPFGDANLIGDPYCILFLGRLSRLTNEHTLGKAMSKYGKVKNLRLVRHIVTGASCGYAFV 650
           DP GD  + GDPYC LF+GRLS LT E TL +AMSKYG+VKNLRLVRHIVTG+S GYAFV
Sbjct: 48  DPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFV 107

Query: 649 EFQSQREMRRAYQDAHHSIIDDIEIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGG 470
           E+++++EM+RAY+DAHHS+IDD EIIVDYNRQ+LM GWIP          KESGQLRFGG
Sbjct: 108 EYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGG 167

Query: 469 RERPFRAPLRPIPYDDLKRLGISPPPEGRYLTRFE 365
           RERPFRAPLRPIPYDDLKRLGI+PPPEGRY +RF+
Sbjct: 168 RERPFRAPLRPIPYDDLKRLGITPPPEGRYKSRFQ 202


>ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula] gi|355499353|gb|AES80556.1| U11/U12 small
           nuclear ribonucleoprotein 35 kDa protein [Medicago
           truncatula]
          Length = 566

 Score =  241 bits (616), Expect = 1e-61
 Identities = 117/171 (68%), Positives = 133/171 (77%)
 Frame = -3

Query: 829 DPFGDANLIGDPYCILFLGRLSRLTNEHTLGKAMSKYGKVKNLRLVRHIVTGASCGYAFV 650
           DPFGD    GDPYC LF+GRLSRLT E TL K MS++G+VKNLRLVR IVTGAS GYAFV
Sbjct: 50  DPFGDPKATGDPYCTLFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFV 109

Query: 649 EFQSQREMRRAYQDAHHSIIDDIEIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGG 470
           EF+++REMRRAY DAHH I+DD EIIVDYNRQQLMPGWIP          KESGQLRFGG
Sbjct: 110 EFETEREMRRAYMDAHHLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNKESGQLRFGG 169

Query: 469 RERPFRAPLRPIPYDDLKRLGISPPPEGRYLTRFEDXXXXXXXXXSVDKDE 317
           RE+PFRAPL+PIPY++LK+LGI PPPEG Y++RF+            DKDE
Sbjct: 170 REKPFRAPLKPIPYEELKKLGIPPPPEGSYMSRFQVPSPPRRDTNLSDKDE 220


>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
           communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
           ribonucleoprotein 70 kD, putative [Ricinus communis]
          Length = 389

 Score =  239 bits (610), Expect = 6e-61
 Identities = 118/171 (69%), Positives = 135/171 (78%)
 Frame = -3

Query: 829 DPFGDANLIGDPYCILFLGRLSRLTNEHTLGKAMSKYGKVKNLRLVRHIVTGASCGYAFV 650
           DP GD  +IGDP+C LF+GRLS  T E+TL KAMSKYGKV+NLRLVR IVTGAS GYAFV
Sbjct: 48  DPLGDPKVIGDPFCTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFV 107

Query: 649 EFQSQREMRRAYQDAHHSIIDDIEIIVDYNRQQLMPGWIPXXXXXXXXXXKESGQLRFGG 470
           E+ ++REMRRAY DAHHS IDD EIIVDYNRQQLMPGWIP          KESGQLRFGG
Sbjct: 108 EYGTEREMRRAYMDAHHSFIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGG 167

Query: 469 RERPFRAPLRPIPYDDLKRLGISPPPEGRYLTRFEDXXXXXXXXXSVDKDE 317
           RERPFRAPL+ +P+D+LKRLGISPPPEGRY++RF           S+D++E
Sbjct: 168 RERPFRAPLQSVPFDELKRLGISPPPEGRYMSRFGVPSPPRRNQSSIDREE 218