BLASTX nr result

ID: Coptis25_contig00012049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012049
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...    71   3e-10
ref|XP_002297715.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264...    67   4e-09
emb|CBI37155.3| unnamed protein product [Vitis vinifera]               67   4e-09
ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    67   5e-09

>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 30/73 (41%), Positives = 49/73 (67%)
 Frame = +1

Query: 619 LQSDKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISM 798
           L+ D+   +V ++  MGF P ++VF+  +QV  GM K  W+ K+EVYR +GWS DE++ +
Sbjct: 229 LKHDRFGETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLL 288

Query: 799 FKKNPSVMAVSVK 837
           F+  P+ M++S K
Sbjct: 289 FRAFPACMSLSEK 301


>ref|XP_002297715.1| predicted protein [Populus trichocarpa]
           gi|224053186|ref|XP_002297717.1| predicted protein
           [Populus trichocarpa] gi|222844973|gb|EEE82520.1|
           predicted protein [Populus trichocarpa]
           gi|222844975|gb|EEE82522.1| predicted protein [Populus
           trichocarpa]
          Length = 386

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/71 (40%), Positives = 47/71 (66%)
 Frame = +1

Query: 619 LQSDKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISM 798
           ++ D++   V  +KN+G  P + VFV+ L+V +GM +  W  K+E  +S GW+EDEV+  
Sbjct: 215 MKPDRMVRVVNSVKNLGLEPKAPVFVHALRVMIGMSESTWKRKIEYMKSLGWTEDEVLLT 274

Query: 799 FKKNPSVMAVS 831
           FK+NP ++A S
Sbjct: 275 FKRNPDILACS 285


>ref|XP_002278053.2| PREDICTED: uncharacterized protein LOC100264327 [Vitis vinifera]
          Length = 390

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +1

Query: 622 QSDKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISMF 801
           +SDK + +V ++  MGF+P    FVN LQ      +  W  K+E+YR +GWSEDE++S F
Sbjct: 218 RSDKFSENVKKVVEMGFNPLKFAFVNALQAVCQTTESTWQQKMEMYRRWGWSEDEILSAF 277

Query: 802 KKNPSVMAVSVK 837
           +  P  M +S K
Sbjct: 278 RNRPQCMQLSEK 289


>emb|CBI37155.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +1

Query: 622 QSDKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISMF 801
           +SDK + +V ++  MGF+P    FVN LQ      +  W  K+E+YR +GWSEDE++S F
Sbjct: 241 RSDKFSENVKKVVEMGFNPLKFAFVNALQAVCQTTESTWQQKMEMYRRWGWSEDEILSAF 300

Query: 802 KKNPSVMAVSVK 837
           +  P  M +S K
Sbjct: 301 RNRPQCMQLSEK 312



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = +1

Query: 628 DKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISMFKK 807
           DK + +V ++  MGF+P  ++FVN LQV   M +  W+ K+  Y+  G SEDE++  F+ 
Sbjct: 624 DKFSKTVKKVMEMGFNPQRLLFVNALQVICQMSESTWEQKINAYKRCGLSEDEIVLAFRN 683

Query: 808 NPSVMAVSVK 837
           +P    +S K
Sbjct: 684 HPICFQLSEK 693


>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 29/69 (42%), Positives = 44/69 (63%)
 Frame = +1

Query: 625 SDKLNASVLELKNMGFSPSSMVFVNGLQVRVGMKKPIWDLKLEVYRSFGWSEDEVISMFK 804
           +D+  A +  +K MGF    M+F++G+    GMKK  W+ K+ V+RSFGW E+E I++F 
Sbjct: 200 ADEFKAILKRVKEMGFDEKGMMFIHGMCALCGMKKAKWESKVSVFRSFGWGEEEFIALFV 259

Query: 805 KNPSVMAVS 831
           K P  M+ S
Sbjct: 260 KQPQFMSNS 268


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