BLASTX nr result

ID: Coptis25_contig00012044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012044
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera] gi|...   111   7e-23
ref|XP_002315514.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_004134491.1| PREDICTED: phylloplanin-like [Cucumis sativu...    99   3e-19
ref|XP_002516941.1| Phylloplanin precursor, putative [Ricinus co...    98   6e-19
ref|XP_002883017.1| hypothetical protein ARALYDRAFT_318437 [Arab...    81   8e-14

>ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera]
           gi|296083359|emb|CBI22995.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
 Frame = +3

Query: 6   LIRIQSTLFCTINGN-SVNGTATPVFPNAAVLLQCGSGNIVVASTITNTSTGQFTILLVT 182
           LIRIQ  LFCT NGN  VNGTATPVFPNA V LQCG+GN++  S+ T  S G F+ILL  
Sbjct: 35  LIRIQGNLFCTANGNMGVNGTATPVFPNAPVQLQCGAGNVI--SSATTNSAGLFSILLDP 92

Query: 183 SEFPVSSVLNNCRLLVNTTLATCNVSL-GTGLLSSPLQYIG 302
            +F +SS+L NC L+VNT L+TCN  L  +G L SPL+ IG
Sbjct: 93  LQFLLSSLLTNCNLVVNTPLSTCNSGLPSSGALLSPLRLIG 133


>ref|XP_002315514.1| predicted protein [Populus trichocarpa] gi|222864554|gb|EEF01685.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  102 bits (253), Expect = 4e-20
 Identities = 63/103 (61%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   GLIRIQSTLFCTINGN-SVNGTATPVFPNAAVLLQCGSGNIVVASTITNTSTGQFTILLV 179
           GLIRIQ TLFCT NGN   NGTATPVFPNA V LQCG GN+V  ST T   +G F+ILL 
Sbjct: 34  GLIRIQGTLFCTANGNMGANGTATPVFPNALVQLQCG-GNVV--STSTTNGSGIFSILLD 90

Query: 180 TSEFPVSSVLNNCRLLVNTTLATCNVSLGT--GLLSSPLQYIG 302
              + +SS+L NC L V+T L +CN SL    GLLSS LQ+IG
Sbjct: 91  PLNYILSSLLTNCNLKVDTPLTSCNSSLPALGGLLSS-LQFIG 132


>ref|XP_004134491.1| PREDICTED: phylloplanin-like [Cucumis sativus]
           gi|449522899|ref|XP_004168463.1| PREDICTED:
           phylloplanin-like [Cucumis sativus]
          Length = 148

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
 Frame = +3

Query: 6   LIRIQSTLFCTINGN-SVNGTATPVFPNAAVLLQCGSGNIVVASTITNTSTGQFTILLVT 182
           LI IQ T+FCT +GN   N T+TPVFPNA V LQCG+GNIV  ST T  + G F++ L  
Sbjct: 26  LINIQGTVFCTADGNIGTNATSTPVFPNALVQLQCGNGNIV--STTTTNNGGIFSMFLNP 83

Query: 183 SEFPVSSVLNNCRLLVNTTLATCNVSL-GTGLLSSPLQYIG 302
            +F +SS+L+NC L+V T ++ CN +L  TG L+S LQ++G
Sbjct: 84  VQFVLSSLLSNCNLVVKTPISDCNATLPSTGFLTSSLQFLG 124


>ref|XP_002516941.1| Phylloplanin precursor, putative [Ricinus communis]
           gi|223544029|gb|EEF45555.1| Phylloplanin precursor,
           putative [Ricinus communis]
          Length = 152

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 58/102 (56%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   GLIRIQSTLFCTINGN-SVNGTATPVFPNAAVLLQCGSGNIVVASTITNTSTGQFTILLV 179
           GLIRIQ T+FCT NGN   NGTATPVFPNA V L CGS  I   ST T    G F+I+L 
Sbjct: 33  GLIRIQGTVFCTANGNMGANGTATPVFPNAQVQLMCGSQMI---STATTNRFGIFSIVLD 89

Query: 180 TSEFPVSSVLNNCRLLVNTTLATCNVSLGT-GLLSSPLQYIG 302
             ++ VSSVL+ C L V T L+ C+ SL T GLL SPL+ +G
Sbjct: 90  PLQYVVSSVLSGCFLKVGTPLSNCDSSLPTGGLLQSPLELVG 131


>ref|XP_002883017.1| hypothetical protein ARALYDRAFT_318437 [Arabidopsis lyrata subsp.
           lyrata] gi|297328857|gb|EFH59276.1| hypothetical protein
           ARALYDRAFT_318437 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   LIRIQSTLFCTINGNSVNGTATPVFPNAAVLLQCGSGNIVVASTITNTSTGQFTILLVTS 185
           L+ I   +FC++NG ++NGT+TP F NA V LQCG  N VV ST T  + G FT+   T 
Sbjct: 67  LVNINGVVFCSLNG-ALNGTSTPAFANAGVQLQCGRQNRVV-STATTNAAGLFTLPTDTI 124

Query: 186 EFPVSSVLNNCRLLVNTTLATCNVSL-GTGLLSSPLQYIG 302
           +  +S++L++CR++V T L+TCN +L   G L S L  IG
Sbjct: 125 QMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIG 164


Top