BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012042
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...   150   1e-34
ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...   134   6e-30
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...   134   6e-30
gb|AFK45778.1| unknown [Medicago truncatula]                          134   6e-30

>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/124 (58%), Positives = 94/124 (75%)
 Frame = -2

Query: 501 IENDLPKNTKCLMDCEAEAILSKIQEQMVILSDDPMIKLPVSFHKGLQYAKSGCGYSNVE 322
           IE DLPKN KCLMDCEA  +L  IQEQMV+LS DP IKLPVSF + LQ+A++G  ++N +
Sbjct: 79  IEQDLPKNAKCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQHARTGARFTNPQ 138

Query: 321 SARRVLETLKANNKVSESEICLIGNICPDGVDELFALMPSLKGNKGKNERAVKDVVGLLA 142
           S RR+LE LK +  VSE EIC I N+CPDGVDE+FAL+PSLK  K      +KD++G L+
Sbjct: 139 SVRRILEGLKKHG-VSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLREPLKDILGQLS 197

Query: 141 KMKE 130
           ++K+
Sbjct: 198 ELKQ 201


>ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|222871958|gb|EEF09089.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  135 bits (340), Expect = 3e-30
 Identities = 71/124 (57%), Positives = 88/124 (70%)
 Frame = -2

Query: 501 IENDLPKNTKCLMDCEAEAILSKIQEQMVILSDDPMIKLPVSFHKGLQYAKSGCGYSNVE 322
           IE++LP+N K LMDCEA  IL  IQ+QMV+LS DP IKLPVSF KGLQYAK+G  Y+N +
Sbjct: 73  IESELPQNAKPLMDCEAAQILQGIQDQMVLLSQDPTIKLPVSFDKGLQYAKNGAHYTNPQ 132

Query: 321 SARRVLETLKANNKVSESEICLIGNICPDGVDELFALMPSLKGNKGKNERAVKDVVGLLA 142
           S RRVLE L+    VS+ EI LI N+ P+  DE FAL+PSLK         +KD++G LA
Sbjct: 133 SVRRVLEALRKYG-VSDGEISLIANVFPETADEAFALVPSLKSKASTLREPLKDILGELA 191

Query: 141 KMKE 130
           K K+
Sbjct: 192 KFKQ 195


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
 Frame = -2

Query: 501 IENDLPKNTKC--LMDCEAEAILSKIQEQMVILSDDPMIKLPVSFHKGLQYAKSGCGYSN 328
           IE +LPKN KC  LMDCEA  +L  IQ+QMV LS DP IK+P SF +GLQYAK    Y N
Sbjct: 95  IEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVN 154

Query: 327 VESARRVLETLKANNKVSESEICLIGNICPDGVDELFALMPSLKGNKGKNERAVKDVVGL 148
            ES R VLETLK    V++SEIC+I N+CPD  DE+FAL+PSLK  + K    + +V+  
Sbjct: 155 AESVRPVLETLKKYG-VTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSE 213

Query: 147 LAKMK 133
           LAK+K
Sbjct: 214 LAKVK 218


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
 Frame = -2

Query: 501 IENDLPKNTKC--LMDCEAEAILSKIQEQMVILSDDPMIKLPVSFHKGLQYAKSGCGYSN 328
           IE +LPKN KC  LMDCEA  +L  IQ+QMV LS DP IK+P SF +GLQYAK    Y N
Sbjct: 95  IEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVN 154

Query: 327 VESARRVLETLKANNKVSESEICLIGNICPDGVDELFALMPSLKGNKGKNERAVKDVVGL 148
            ES R VLETLK    V++SEIC+I N+CPD  DE+FAL+PSLK  + K    + +V+  
Sbjct: 155 AESVRPVLETLKKYG-VTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSE 213

Query: 147 LAKMK 133
           LAK+K
Sbjct: 214 LAKVK 218


>gb|AFK45778.1| unknown [Medicago truncatula]
          Length = 201

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/126 (53%), Positives = 89/126 (70%), Gaps = 2/126 (1%)
 Frame = -2

Query: 501 IENDLPKNTKCLMDCEAEAILSKIQEQMVILSDDPMIKLPVSFHKGLQYAKSGCG--YSN 328
           ++ +LP+N KCLMDCEA  +L  IQ+QMV LS DP IK+P SF KGL YAKS     YSN
Sbjct: 75  VDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSKYSN 134

Query: 327 VESARRVLETLKANNKVSESEICLIGNICPDGVDELFALMPSLKGNKGKNERAVKDVVGL 148
            ES R  LE L  N+ ++ESEIC+I N+CP+  DE+FAL+PSLK  +G N + V++ +  
Sbjct: 135 PESVRHTLEPL-MNHDLTESEICVIANVCPETADEVFALLPSLKSKRGINSQPVEEALSE 193

Query: 147 LAKMKE 130
           LAK K+
Sbjct: 194 LAKFKQ 199