BLASTX nr result

ID: Coptis25_contig00012041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012041
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23190.3| unnamed protein product [Vitis vinifera]              501   e-139
emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]   501   e-139
ref|XP_002305591.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_002518510.1| conserved hypothetical protein [Ricinus comm...   480   e-133
ref|XP_002335975.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131

>emb|CBI23190.3| unnamed protein product [Vitis vinifera]
          Length = 1286

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/377 (66%), Positives = 292/377 (77%), Gaps = 1/377 (0%)
 Frame = -3

Query: 1386 ARSLESFCTSIGIKLSLMNRMSGFSKAVXXXXXXXXXXXXXXXXXXXXXPLLYSPEVGQQ 1207
            ARSLE+FC   GI+ SLMN +   +KAV                     PLLYSP+VG Q
Sbjct: 909  ARSLETFCAHNGIRFSLMNGILENAKAVPGTAFPTPFTSPLFTGSFPSSPLLYSPDVGPQ 968

Query: 1206 RINRIDLVPPLSLDGFQTGKVXXXXXXXXXSRNLSVPVQSLLEKLQNAPQVGVVHLALQN 1027
            R+ RIDLVPPLSLDGFQ+GK           R LS+PVQSL EKLQN+PQVG++HLALQN
Sbjct: 969  RVGRIDLVPPLSLDGFQSGKTTSHPNSPSGPRQLSLPVQSLHEKLQNSPQVGIIHLALQN 1028

Query: 1026 DAVGSVLSWQNDVFVVAEPGELADRFLRSVKFSLLSTTRGHNRKETSALAKVLTVADLVA 847
            D++GS+LSWQ DVFVVAEPGELAD+FL+SVKFSLLS  R H R++ S LA + T+AD+VA
Sbjct: 1029 DSLGSILSWQKDVFVVAEPGELADKFLQSVKFSLLSVMRAHRRRDASVLAGISTIADMVA 1088

Query: 846  YRPYFQVGGIVHRYIGRQTQVMEDDKEIGAFMFRRTVPSMHLTPDDVRWMVGAWRDRIII 667
             RP FQ+GGIVHRYIGRQTQVMEDD+EIGA+MFRRTVPS+HLT DDVRWMVGAWRDRIII
Sbjct: 1089 RRPCFQIGGIVHRYIGRQTQVMEDDQEIGAYMFRRTVPSLHLTADDVRWMVGAWRDRIII 1148

Query: 666  CTGTYGPCPSLVKAFLDSGAKTVISPSIEPPEMQLTTFHGSGEFKDLETGRFEIGDEDAD 487
            CTGTYGP  +L+KAFLDSGAK VI PS+EPPE Q   FHGSGEF   E G+FEIG+E+A+
Sbjct: 1149 CTGTYGPTSTLIKAFLDSGAKAVICPSVEPPETQSVAFHGSGEFNYGENGKFEIGEEEAE 1208

Query: 486  DEEVEPSSPVSDWEDSDLEKGGEH-SYGWVDEEEELSKFVSHLYDALFREGARVDVALQH 310
            DEE E S+PVSDWEDSD EK GE+    W D+E ELS+F+  LYD+LFREG+ VD ALQH
Sbjct: 1209 DEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREGSTVDDALQH 1268

Query: 309  ALHLHPKLRYSCHLPNI 259
            AL  H KLRYSCHLP+I
Sbjct: 1269 ALAAHRKLRYSCHLPSI 1285


>emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]
          Length = 1286

 Score =  501 bits (1289), Expect = e-139
 Identities = 252/377 (66%), Positives = 292/377 (77%), Gaps = 1/377 (0%)
 Frame = -3

Query: 1386 ARSLESFCTSIGIKLSLMNRMSGFSKAVXXXXXXXXXXXXXXXXXXXXXPLLYSPEVGQQ 1207
            ARSLE+FC   GI+ SLMN +   +KAV                     PLLYSP+VG Q
Sbjct: 909  ARSLETFCAHNGIRFSLMNGILENAKAVPGTAFPTPFTSPLFTGSFPSSPLLYSPDVGPQ 968

Query: 1206 RINRIDLVPPLSLDGFQTGKVXXXXXXXXXSRNLSVPVQSLLEKLQNAPQVGVVHLALQN 1027
            R+ RIDLVPPLSLDGFQ+GK           R LS+PVQSL EKLQN+PQVG++HLALQN
Sbjct: 969  RVGRIDLVPPLSLDGFQSGKTTSHPNSPSGPRQLSLPVQSLHEKLQNSPQVGIIHLALQN 1028

Query: 1026 DAVGSVLSWQNDVFVVAEPGELADRFLRSVKFSLLSTTRGHNRKETSALAKVLTVADLVA 847
            D++GS+LSWQ DVFVVAEPGELAD+FL+SVKFSLLS  R H R++ S LA + T+AD+VA
Sbjct: 1029 DSLGSILSWQKDVFVVAEPGELADKFLQSVKFSLLSVMRAHRRRDASVLAGISTIADMVA 1088

Query: 846  YRPYFQVGGIVHRYIGRQTQVMEDDKEIGAFMFRRTVPSMHLTPDDVRWMVGAWRDRIII 667
             RP FQ+GGIVHRYIGRQTQVMEDD+EIGA+MFRRTVPS+HLT DDVRWMVGAWRDRIII
Sbjct: 1089 RRPCFQIGGIVHRYIGRQTQVMEDDQEIGAYMFRRTVPSLHLTADDVRWMVGAWRDRIII 1148

Query: 666  CTGTYGPCPSLVKAFLDSGAKTVISPSIEPPEMQLTTFHGSGEFKDLETGRFEIGDEDAD 487
            CTGTYGP  +L+KAFLDSGAK VI PS+EPPE Q   FHGSGEF   E G+FEIG+E+A+
Sbjct: 1149 CTGTYGPTSTLIKAFLDSGAKAVICPSVEPPETQSVAFHGSGEFNYGENGKFEIGEEEAE 1208

Query: 486  DEEVEPSSPVSDWEDSDLEKGGEH-SYGWVDEEEELSKFVSHLYDALFREGARVDVALQH 310
            DEE E S+PVSDWEDSD EK GE+    W D+E ELS+F+  LYD+LFREG+ VD ALQH
Sbjct: 1209 DEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREGSTVDDALQH 1268

Query: 309  ALHLHPKLRYSCHLPNI 259
            AL  H KLRYSCHLP+I
Sbjct: 1269 ALAAHRKLRYSCHLPSI 1285


>ref|XP_002305591.1| predicted protein [Populus trichocarpa] gi|222848555|gb|EEE86102.1|
            predicted protein [Populus trichocarpa]
          Length = 1276

 Score =  489 bits (1258), Expect = e-136
 Identities = 248/379 (65%), Positives = 292/379 (77%), Gaps = 3/379 (0%)
 Frame = -3

Query: 1386 ARSLESFCTSIGIKLSLMNRMSGFSKAVXXXXXXXXXXXXXXXXXXXXXPLLYSPEVGQQ 1207
            AR+LESFCT   I+LSLM+  SG ++ V                     PLL+SP+ G Q
Sbjct: 897  ARALESFCTRNAIRLSLMHATSGIARTVPTGTFPSPFASPLITGSFPSSPLLFSPDFGSQ 956

Query: 1206 RINRIDLVPPLSLDGFQTGKVXXXXXXXXXSRNLSVPVQSLLEKLQNAPQVGVVHLALQN 1027
            RI RID+VPPLSLDG Q+GK           R LS+PV+SL EKLQN+PQVG+VHLALQN
Sbjct: 957  RIGRIDMVPPLSLDGAQSGKTALSPPMSPKHRRLSLPVRSLHEKLQNSPQVGLVHLALQN 1016

Query: 1026 DAVGSVLSWQNDVFVVAEPGELADRFLRSVKFSLLSTTRGHNRKETSALAKVLTVADLVA 847
            D+ GS+LSWQNDVFVVAEPG+LAD+FL+SVKFSLLS  R  +RK  S LA + TVADLV 
Sbjct: 1017 DSSGSILSWQNDVFVVAEPGDLADKFLQSVKFSLLSMNRSRHRKIASLLANISTVADLVH 1076

Query: 846  YRPYFQVGGIVHRYIGRQTQVMEDDKEIGAFMFRRTVPSMHLTPDDVRWMVGAWRDRIII 667
             +PYFQVG ++HRYIGRQTQVMEDD+EIGA+MFRRTVPSMHLTP+DVRWMVGAWRDRIII
Sbjct: 1077 CKPYFQVGNVIHRYIGRQTQVMEDDQEIGAYMFRRTVPSMHLTPEDVRWMVGAWRDRIII 1136

Query: 666  CTGTYGPCPSLVKAFLDSGAKTVISPSIEPPEMQLTTFHGSGEFKDLETGRFEIGDEDA- 490
            CTGTYGP  +L+KAFLDSGAK V+ PS EP EM +T  HGSGEF  LE GRFEIG+E+A 
Sbjct: 1137 CTGTYGPTQTLIKAFLDSGAKAVVCPSAEPLEMPVTLVHGSGEFNVLENGRFEIGEEEAE 1196

Query: 489  -DDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREGARVDVAL 316
             ++EE EP+SPVSDWEDSD EK G+ S G W D+EE+LS+F+  LYD+LF+EGARVD AL
Sbjct: 1197 EEEEEAEPTSPVSDWEDSDAEKHGDRSIGFWDDDEEDLSQFICKLYDSLFQEGARVDAAL 1256

Query: 315  QHALHLHPKLRYSCHLPNI 259
            Q+AL  H + RYSCHLP I
Sbjct: 1257 QNALASHRRQRYSCHLPGI 1275


>ref|XP_002518510.1| conserved hypothetical protein [Ricinus communis]
            gi|223542355|gb|EEF43897.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1318

 Score =  480 bits (1236), Expect = e-133
 Identities = 246/378 (65%), Positives = 288/378 (76%), Gaps = 2/378 (0%)
 Frame = -3

Query: 1386 ARSLESFCTSIGIKLSLMNRMSGFSKAVXXXXXXXXXXXXXXXXXXXXXPLLYSPEVGQQ 1207
            AR+LESFCT+ GI+LSLM   SG +K                       PLL+SP+ G  
Sbjct: 940  ARALESFCTNNGIRLSLMLGASGIAKIAPATTFPSPFTSPLITGSFPSSPLLFSPDFGPH 999

Query: 1206 RINRIDLVPPLSLDGFQTGK-VXXXXXXXXXSRNLSVPVQSLLEKLQNAPQVGVVHLALQ 1030
            RI RID+VPPLSLDG Q+ K            R LS+PV+SL EKLQN PQVG+VHLALQ
Sbjct: 1000 RIGRIDMVPPLSLDGVQSVKNAASPPRSPSGRRQLSLPVRSLHEKLQNTPQVGIVHLALQ 1059

Query: 1029 NDAVGSVLSWQNDVFVVAEPGELADRFLRSVKFSLLSTTRGHNRKETSALAKVLTVADLV 850
            ND+VGS++SWQNDVFVVAEPG+LA++FL+SVKFSLLS  R   RK  S  A + TVADLV
Sbjct: 1060 NDSVGSIISWQNDVFVVAEPGDLANKFLQSVKFSLLSMMRSRRRKVPSFFANISTVADLV 1119

Query: 849  AYRPYFQVGGIVHRYIGRQTQVMEDDKEIGAFMFRRTVPSMHLTPDDVRWMVGAWRDRII 670
             Y+ YFQVG +VHRYIGRQTQVMEDD+EIGA+MFRRTVPSMHLTPDDVRWMVGAWRDRII
Sbjct: 1120 RYKTYFQVGNVVHRYIGRQTQVMEDDQEIGAYMFRRTVPSMHLTPDDVRWMVGAWRDRII 1179

Query: 669  ICTGTYGPCPSLVKAFLDSGAKTVISPSIEPPEMQLTTFHGSGEFKDLETGRFEIGDEDA 490
            ICTGTYGP P+L+KAFLDSGAK V+ PS +  E+ LT+ HGS EF  LE GRFEIG+E+A
Sbjct: 1180 ICTGTYGPIPTLIKAFLDSGAKAVVCPSADALEIPLTSTHGSEEFHVLENGRFEIGEEEA 1239

Query: 489  DDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYDALFREGARVDVALQ 313
            +DEE EP SP SDWEDSDLEK GE + G W DEE+ELS+FV HLYD++F+EGA+VD AL+
Sbjct: 1240 EDEEAEPVSPRSDWEDSDLEKNGERATGFWDDEEDELSQFVCHLYDSIFQEGAKVDAALR 1299

Query: 312  HALHLHPKLRYSCHLPNI 259
            +AL  H +LRYSCHL  I
Sbjct: 1300 NALASHRRLRYSCHLSGI 1317


>ref|XP_002335975.1| predicted protein [Populus trichocarpa] gi|222836541|gb|EEE74948.1|
            predicted protein [Populus trichocarpa]
          Length = 1319

 Score =  473 bits (1218), Expect = e-131
 Identities = 243/392 (61%), Positives = 292/392 (74%), Gaps = 16/392 (4%)
 Frame = -3

Query: 1386 ARSLESFCTSIGIKLSLMNRMSGFSKAVXXXXXXXXXXXXXXXXXXXXXPLLYSPEVGQQ 1207
            +R+LE+FC+   I LSLM+  SG ++ V                     PLL+SP++G Q
Sbjct: 927  SRALETFCSRNAIILSLMHATSGIARTVPPGTFSSPFSSPLITGSFPSSPLLFSPDLGSQ 986

Query: 1206 RINRIDLVPPLSLDGFQTGKVXXXXXXXXXS-RNLSVPVQSLLEKLQNAPQVGVVHLALQ 1030
            RI RID VPPLSLDG Q+GK            R LS+PV+SL EKLQN+PQVG++HLALQ
Sbjct: 987  RIGRIDTVPPLSLDGVQSGKTALSPPMSPSKHRQLSLPVRSLHEKLQNSPQVGIIHLALQ 1046

Query: 1029 NDAVGSVLS--------------WQNDVFVVAEPGELADRFLRSVKFSLLSTTRGHNRKE 892
            ND+ GS+LS              WQNDVFVVAEPG+LAD+FL+SVKFSLLS  R  +R+ 
Sbjct: 1047 NDSSGSILSFRHCPKVPNACFSSWQNDVFVVAEPGDLADKFLQSVKFSLLSMNRSRHRRI 1106

Query: 891  TSALAKVLTVADLVAYRPYFQVGGIVHRYIGRQTQVMEDDKEIGAFMFRRTVPSMHLTPD 712
            TS +  + TV+DLV  +P F VG ++HRYIGRQTQVMEDD+EIGA+MFRRTVPSMHLTP+
Sbjct: 1107 TSLVGNISTVSDLVHCKPCFLVGNVIHRYIGRQTQVMEDDQEIGAYMFRRTVPSMHLTPE 1166

Query: 711  DVRWMVGAWRDRIIICTGTYGPCPSLVKAFLDSGAKTVISPSIEPPEMQLTTFHGSGEFK 532
            DVRWMVGAWRDRIIICTG YGP P+L+KAFLDSGAK VI PS+EP E+ +T  HGSGE+ 
Sbjct: 1167 DVRWMVGAWRDRIIICTGAYGPMPTLIKAFLDSGAKAVICPSVEPLEIPVTLVHGSGEYN 1226

Query: 531  DLETGRFEIGDEDADDEEVEPSSPVSDWEDSDLEKGGEHSYG-WVDEEEELSKFVSHLYD 355
             LE GRFEIG+E+A++EE EP+SPVSDWEDSD EK G+HS G W D+EEELS+FV  LYD
Sbjct: 1227 VLENGRFEIGEEEAEEEEAEPTSPVSDWEDSDPEKNGDHSIGFWDDDEEELSQFVCKLYD 1286

Query: 354  ALFREGARVDVALQHALHLHPKLRYSCHLPNI 259
             LFR GARVD ALQ+AL LH +LRYSCHLP+I
Sbjct: 1287 LLFRVGARVDAALQNALALHQRLRYSCHLPSI 1318


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