BLASTX nr result

ID: Coptis25_contig00012038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012038
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890146.1| hypothetical protein ARALYDRAFT_471810 [Arab...   409   e-111
ref|NP_563991.1| uncharacterized protein [Arabidopsis thaliana] ...   407   e-111
ref|XP_002303871.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002271931.1| PREDICTED: uncharacterized protein LOC100263...   402   e-109
ref|XP_002333371.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109

>ref|XP_002890146.1| hypothetical protein ARALYDRAFT_471810 [Arabidopsis lyrata subsp.
            lyrata] gi|297335988|gb|EFH66405.1| hypothetical protein
            ARALYDRAFT_471810 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  409 bits (1050), Expect = e-111
 Identities = 194/248 (78%), Positives = 210/248 (84%)
 Frame = -2

Query: 1216 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 1037
            PA+IVGGGRVG AL +MGNG DL++KRGEAVP  F GP+LVCTRNDDLDAVL+ TP+SRW
Sbjct: 56   PAVIVGGGRVGRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRW 115

Query: 1036 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 857
             DLVFFQNGM+EPW  SKGL D +QVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS
Sbjct: 116  KDLVFFQNGMMEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 175

Query: 856  AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 677
             +A RLQ+GGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGA+VG VEKEYR     
Sbjct: 176  EIAARLQSGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSI 235

Query: 676  XXXXXXXXXXXXXXXLFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 497
                            FEE MVERLCAYSRAV+HFPTAVKEFKWRNGWFYSL+++AI EG
Sbjct: 236  LIQELAAAAAAEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEG 295

Query: 496  KPDPCPLH 473
            KPDPCPLH
Sbjct: 296  KPDPCPLH 303


>ref|NP_563991.1| uncharacterized protein [Arabidopsis thaliana]
            gi|6587814|gb|AAF18505.1|AC010924_18 ESTs gb|AI992412,
            gb|AI994629 come from this gene [Arabidopsis thaliana]
            gi|12083328|gb|AAG48823.1|AF332460_1 unknown protein
            [Arabidopsis thaliana] gi|18176355|gb|AAL60029.1| unknown
            protein [Arabidopsis thaliana]
            gi|332191287|gb|AEE29408.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 313

 Score =  407 bits (1046), Expect = e-111
 Identities = 193/248 (77%), Positives = 210/248 (84%)
 Frame = -2

Query: 1216 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 1037
            PA+IVGGGRVG AL +MGNG DL++KRGEAVP  F GP+LVCTRNDDLDAVL+ TP+SRW
Sbjct: 56   PAVIVGGGRVGRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRW 115

Query: 1036 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 857
             DLVFFQNGM+EPW  SKGL D +QVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS
Sbjct: 116  KDLVFFQNGMMEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 175

Query: 856  AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 677
             +A RLQ+GGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGA+VG VEKEYR     
Sbjct: 176  EIAARLQSGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSR 235

Query: 676  XXXXXXXXXXXXXXXLFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 497
                            FEE MVERLCAYSRAV+HFPTAVKEFKWRNGWFYSL+++AI EG
Sbjct: 236  LIQELAAAAAAEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEG 295

Query: 496  KPDPCPLH 473
            +PDPCPLH
Sbjct: 296  QPDPCPLH 303


>ref|XP_002303871.1| predicted protein [Populus trichocarpa] gi|222841303|gb|EEE78850.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  402 bits (1034), Expect = e-110
 Identities = 193/249 (77%), Positives = 210/249 (84%)
 Frame = -2

Query: 1219 VPAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSR 1040
            VPA+IVGGGRVG AL +MG+G+DL++KRG+ VP  F GPVLVCTRNDDLDAVL+ TPKSR
Sbjct: 11   VPAVIVGGGRVGRALQEMGSGQDLLVKRGDPVPLDFEGPVLVCTRNDDLDAVLEVTPKSR 70

Query: 1039 WNDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWA 860
            W+DLVFFQNGMLEPW  SKGL D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWA
Sbjct: 71   WSDLVFFQNGMLEPWFQSKGLGDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWA 130

Query: 859  SAVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXX 680
            SAVA RL AGGLSCKVLDKE FQKQMLEKLIWI AFMLVGARHPGATVG VEKE+R    
Sbjct: 131  SAVAARLHAGGLSCKVLDKETFQKQMLEKLIWISAFMLVGARHPGATVGAVEKEFRSEVS 190

Query: 679  XXXXXXXXXXXXXXXXLFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITE 500
                            +FEEA+ ERLCAYSRAVAHFPTAVKEFKWRNGWFYSL+ +A+ E
Sbjct: 191  SLIAELASAAAAEKGIVFEEAIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSDKAVAE 250

Query: 499  GKPDPCPLH 473
            GKPDPCPLH
Sbjct: 251  GKPDPCPLH 259


>ref|XP_002271931.1| PREDICTED: uncharacterized protein LOC100263834 [Vitis vinifera]
          Length = 301

 Score =  402 bits (1033), Expect = e-109
 Identities = 192/248 (77%), Positives = 212/248 (85%)
 Frame = -2

Query: 1216 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 1037
            PA+IVGGGRVG AL  MG+G DL++KRG++VP  F GP+LVCTRNDDLDAVL++TPKSRW
Sbjct: 44   PAVIVGGGRVGRALQGMGSGDDLLVKRGDSVPLDFAGPILVCTRNDDLDAVLESTPKSRW 103

Query: 1036 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 857
            +DLVFFQNGMLEPWL SKGL+D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWAS
Sbjct: 104  SDLVFFQNGMLEPWLQSKGLSDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWAS 163

Query: 856  AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 677
            AVA RL AGGLSCKVLDKEAFQKQMLEKLIWI AFMLVGARHPGATVGVVEKE+R     
Sbjct: 164  AVAGRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHPGATVGVVEKEFRSEVSS 223

Query: 676  XXXXXXXXXXXXXXXLFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 497
                           +F+E M +RLCAYSRAV+HFPTA KEFKWRNGWFYSL+Q+AI EG
Sbjct: 224  LIGELASAAAVEKGIVFDEGMEDRLCAYSRAVSHFPTAAKEFKWRNGWFYSLSQKAIAEG 283

Query: 496  KPDPCPLH 473
            KPDPCPLH
Sbjct: 284  KPDPCPLH 291


>ref|XP_002333371.1| predicted protein [Populus trichocarpa] gi|222836353|gb|EEE74760.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  400 bits (1029), Expect = e-109
 Identities = 191/248 (77%), Positives = 209/248 (84%)
 Frame = -2

Query: 1216 PAIIVGGGRVGTALLDMGNGRDLMIKRGEAVPSGFPGPVLVCTRNDDLDAVLDNTPKSRW 1037
            PA+IVGGGRVG AL +MG+G+DL++KRG+ VP  F GP+LVCTRNDDLDAVL+ TPKSRW
Sbjct: 12   PAVIVGGGRVGRALQEMGSGQDLLVKRGDPVPLDFEGPILVCTRNDDLDAVLEVTPKSRW 71

Query: 1036 NDLVFFQNGMLEPWLHSKGLNDVEQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWAS 857
            +DLVFFQNGMLEPW  SKGL D +QVLAYFAVSKLGEPP+DGKTDTNPEGLTAAYGKWAS
Sbjct: 72   SDLVFFQNGMLEPWFQSKGLGDADQVLAYFAVSKLGEPPIDGKTDTNPEGLTAAYGKWAS 131

Query: 856  AVATRLQAGGLSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGATVGVVEKEYRXXXXX 677
            AVA RL AGGLSCKVLDKE FQKQMLEKLIWI AFMLVGARHPGATVG VEKE+R     
Sbjct: 132  AVAARLHAGGLSCKVLDKETFQKQMLEKLIWISAFMLVGARHPGATVGAVEKEFRSEVSS 191

Query: 676  XXXXXXXXXXXXXXXLFEEAMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLTQQAITEG 497
                           +FEEA+ ERLCAYSRAVAHFPTAVKEFKWRNGWFYSL+ +A+ EG
Sbjct: 192  LIAELASAAAAEKGIVFEEAIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSDKAVAEG 251

Query: 496  KPDPCPLH 473
            KPDPCPLH
Sbjct: 252  KPDPCPLH 259


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