BLASTX nr result

ID: Coptis25_contig00012027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012027
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17712.3| unnamed protein product [Vitis vinifera]               82   7e-14
ref|XP_002268929.1| PREDICTED: uncharacterized protein LOC100254...    82   7e-14
emb|CAN75558.1| hypothetical protein VITISV_028190 [Vitis vinifera]    82   7e-14

>emb|CBI17712.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 67/205 (32%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
 Frame = -1

Query: 601 THQEKQQLNLFPLHPE---EKEDHNNSNVAHFFLTDLATETLSSLIWSTSGKXXXXXXXX 431
           T     QLNLFPLHPE   E +D ++ N+A+FF        L+ L+   +G         
Sbjct: 73  TRNHHHQLNLFPLHPENLVEDKDMHDENMAYFFAASDGGANLNGLLGGDTGAAVPS---- 128

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSSCEPSIAYA--------SKSWLERSA 275
                                             S  PS+ YA          S L R+A
Sbjct: 129 --------------------------------GDSLSPSLTYAYGGQDSEEGASTLVRAA 156

Query: 274 LRGGKNVERDLSEEKWVCF--------EEVTSCVPEIXXXXXXXXXXXXLDYDEIMNAWS 119
           LR   N ERD SEEKWV +        EEVTSC  ++            LDY EI+NAWS
Sbjct: 157 LR---NRERDASEEKWVSYSEVVEKKEEEVTSCAADLWYKNHTQRLSLKLDYQEILNAWS 213

Query: 118 DKGPLYLDHVDGELGSHIVPDVLHD 44
            KGPL+   ++GE     VPD+ HD
Sbjct: 214 GKGPLF---IEGE-SPQTVPDLAHD 234


>ref|XP_002268929.1| PREDICTED: uncharacterized protein LOC100254358 [Vitis vinifera]
          Length = 310

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 67/205 (32%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
 Frame = -1

Query: 601 THQEKQQLNLFPLHPE---EKEDHNNSNVAHFFLTDLATETLSSLIWSTSGKXXXXXXXX 431
           T     QLNLFPLHPE   E +D ++ N+A+FF        L+ L+   +G         
Sbjct: 65  TRNHHHQLNLFPLHPENLVEDKDMHDENMAYFFAASDGGANLNGLLGGDTGAAVPS---- 120

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSSCEPSIAYA--------SKSWLERSA 275
                                             S  PS+ YA          S L R+A
Sbjct: 121 --------------------------------GDSLSPSLTYAYGGQDSEEGASTLVRAA 148

Query: 274 LRGGKNVERDLSEEKWVCF--------EEVTSCVPEIXXXXXXXXXXXXLDYDEIMNAWS 119
           LR   N ERD SEEKWV +        EEVTSC  ++            LDY EI+NAWS
Sbjct: 149 LR---NRERDASEEKWVSYSEVVEKKEEEVTSCAADLWYKNHTQRLSLKLDYQEILNAWS 205

Query: 118 DKGPLYLDHVDGELGSHIVPDVLHD 44
            KGPL+   ++GE     VPD+ HD
Sbjct: 206 GKGPLF---IEGE-SPQTVPDLAHD 226


>emb|CAN75558.1| hypothetical protein VITISV_028190 [Vitis vinifera]
          Length = 310

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 67/205 (32%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
 Frame = -1

Query: 601 THQEKQQLNLFPLHPE---EKEDHNNSNVAHFFLTDLATETLSSLIWSTSGKXXXXXXXX 431
           T     QLNLFPLHPE   E +D ++ N+A+FF        L+ L+   +G         
Sbjct: 65  TRNHHHQLNLFPLHPENLVEDKDMHDENMAYFFAASDGGANLNGLLGGDTGAAVPS---- 120

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSSCEPSIAYA--------SKSWLERSA 275
                                             S  PS+ YA          S L R+A
Sbjct: 121 --------------------------------GDSLSPSLTYAYGGQDSEEGASTLVRAA 148

Query: 274 LRGGKNVERDLSEEKWVCF--------EEVTSCVPEIXXXXXXXXXXXXLDYDEIMNAWS 119
           LR   N ERD SEEKWV +        EEVTSC  ++            LDY EI+NAWS
Sbjct: 149 LR---NRERDASEEKWVSYSEVVEKKEEEVTSCAADLWYKNHTQRLSLKLDYQEILNAWS 205

Query: 118 DKGPLYLDHVDGELGSHIVPDVLHD 44
            KGPL+   ++GE     VPD+ HD
Sbjct: 206 GKGPLF---IEGE-SPQTVPDLAHD 226


Top