BLASTX nr result

ID: Coptis25_contig00011983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011983
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    89   4e-16
emb|CBI23880.3| unnamed protein product [Vitis vinifera]               89   4e-16
emb|CBI38595.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CAN76331.1| hypothetical protein VITISV_014225 [Vitis vinifera]    86   4e-15

>ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|222840607|gb|EEE78154.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = +1

Query: 10  GCYNPQGAVIYYLLAGSPAIIANLWEVTDKDIDRFGKRMLSAWWLQERKSSTIGYNPVNL 189
           GCY PQG  + YLLAGSP I+ANLWEVTDKDIDRFGK ML A WL+ER S ++G +  NL
Sbjct: 574 GCYAPQGTALSYLLAGSPVIVANLWEVTDKDIDRFGKAMLDA-WLKERSSVSLGCDQCNL 632

Query: 190 VEK-FESMDIETNSGNATKKTSR 255
           V K FE+M+I+   G A KK  +
Sbjct: 633 VAKEFEAMNIKAGKGKAKKKVPK 655


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +1

Query: 10   GCYNPQGAVIYYLLAGSPAIIANLWEVTDKDIDRFGKRMLSAWWLQERKSSTIGYNPVNL 189
            G Y PQG  + YL AGSP I+ANLWEVTDKDIDRFGK ML A WL+ER S ++      L
Sbjct: 2059 GQYTPQGTHLSYLSAGSPVIVANLWEVTDKDIDRFGKAMLDA-WLRERSSPSVACAQCRL 2117

Query: 190  VEKFESMDIETNSGNATKKTSR 255
            V + +SM I    G+A KK  R
Sbjct: 2118 VAELKSMSITGGKGDAKKKIPR 2139


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +1

Query: 10   GCYNPQGAVIYYLLAGSPAIIANLWEVTDKDIDRFGKRMLSAWWLQERKSSTIGYNPVNL 189
            G Y PQG  + YL AGSP I+ANLWEVTDKDIDRFGK ML A WL+ER S ++      L
Sbjct: 2039 GQYTPQGTHLSYLSAGSPVIVANLWEVTDKDIDRFGKAMLDA-WLRERSSPSVACAQCRL 2097

Query: 190  VEKFESMDIETNSGNATKKTSR 255
            V + +SM I    G+A KK  R
Sbjct: 2098 VAELKSMSITGGKGDAKKKIPR 2119


>emb|CBI38595.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/82 (53%), Positives = 53/82 (64%)
 Frame = +1

Query: 10  GCYNPQGAVIYYLLAGSPAIIANLWEVTDKDIDRFGKRMLSAWWLQERKSSTIGYNPVNL 189
           G Y PQG  + YL AG+P  +ANLWEVTDKDIDRFGK ML A WL+ER S ++      L
Sbjct: 125 GQYTPQGTHLSYLSAGTPVRVANLWEVTDKDIDRFGKAMLDA-WLRERSSPSVACAQCRL 183

Query: 190 VEKFESMDIETNSGNATKKTSR 255
           V + +SM I    G+A KK  R
Sbjct: 184 VPELKSMSITRGKGDAKKKIPR 205


>emb|CAN76331.1| hypothetical protein VITISV_014225 [Vitis vinifera]
          Length = 525

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/82 (53%), Positives = 52/82 (63%)
 Frame = +1

Query: 10  GCYNPQGAVIYYLLAGSPAIIANLWEVTDKDIDRFGKRMLSAWWLQERKSSTIGYNPVNL 189
           G Y PQG  + YL AG P  +ANLWEVTDKDIDRFGK ML A WL+ER S ++      L
Sbjct: 394 GQYTPQGTHLSYLSAGXPVXVANLWEVTDKDIDRFGKAMLDA-WLRERSSPSVACAQCRL 452

Query: 190 VEKFESMDIETNSGNATKKTSR 255
           V + +SM I    G+A KK  R
Sbjct: 453 VPELKSMSITRGKGDAKKKIPR 474


Top