BLASTX nr result

ID: Coptis25_contig00011969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011969
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311663.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
emb|CBI26382.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254...    74   2e-11
ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263...    72   8e-11
gb|ACN30669.1| unknown [Zea mays] gi|413917624|gb|AFW57556.1| ag...    69   5e-10

>ref|XP_002311663.1| predicted protein [Populus trichocarpa] gi|222851483|gb|EEE89030.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/63 (55%), Positives = 40/63 (63%)
 Frame = +1

Query: 415 YPIKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPVIQET 594
           Y I L  PP GEG  YE   KD RPSL WSPE GWTVPI +  +  H CARL++PV Q +
Sbjct: 136 YQIDLFPPPAGEGSSYEASSKDFRPSLSWSPENGWTVPIPSGIDYHHPCARLIKPVNQGS 195

Query: 595 GTN 603
             N
Sbjct: 196 SIN 198


>emb|CBI26382.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = +1

Query: 421 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV 582
           I L  PP GEG  YEV C DLRPSL+WSP  GW VPI  ESE    CARLV+PV
Sbjct: 153 IDLLPPPDGEGLSYEVFCNDLRPSLDWSPSYGWRVPIPTESETGRCCARLVKPV 206


>ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254457 [Vitis vinifera]
          Length = 376

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = +1

Query: 421 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV 582
           I L  PP GEG  YEV C DLRPSL+WSP  GW VPI  ESE    CARLV+PV
Sbjct: 142 IDLLPPPDGEGLSYEVFCNDLRPSLDWSPSYGWRVPIPTESETGRCCARLVKPV 195


>ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263001 [Vitis vinifera]
          Length = 936

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +1

Query: 421 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV 582
           I L  PP GEG  YEV CKDLRPSL+WSP  GW VP   ESE    CA+LV+PV
Sbjct: 702 IDLLPPPNGEGLSYEVFCKDLRPSLDWSPSYGWRVPSPMESETGRCCAQLVKPV 755


>gb|ACN30669.1| unknown [Zea mays] gi|413917624|gb|AFW57556.1| agenet domain
           containing protein isoform 1 [Zea mays]
           gi|413917625|gb|AFW57557.1| agenet domain containing
           protein isoform 2 [Zea mays]
          Length = 344

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +1

Query: 421 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPVIQETGT 600
           I+LP PP+GEGKCY+  C DLRP+LEWS   GW VP+S  +      ARL+Q    E+  
Sbjct: 140 IELPAPPIGEGKCYKAKCSDLRPTLEWSLARGWMVPLSQANGKGWHAARLLQHYKSESDD 199

Query: 601 NTD 609
           + D
Sbjct: 200 DND 202


Top