BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011961
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147674.1| PREDICTED: uncharacterized protein LOC101215...    80   2e-12
ref|XP_002868304.1| hypothetical protein ARALYDRAFT_915472 [Arab...    79   3e-12
ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...    76   3e-11
gb|AAL32591.1| Unknown protein [Arabidopsis thaliana] gi|2731193...    75   4e-11
ref|NP_193156.2| pentatricopeptide repeat-containing protein-lik...    75   4e-11

>ref|XP_004147674.1| PREDICTED: uncharacterized protein LOC101215780 [Cucumis sativus]
          Length = 1079

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 21/104 (20%)
 Frame = +1

Query: 94  EEKMQSHG-HICCRCGWSYANSHPSAKQRRAHKKVCGNLQGFKILKPQ----------DE 240
           +++ ++HG H+C +CGW + N HPSAK RRAHK+VCG ++GFK+++ +          D+
Sbjct: 5   DQRQENHGVHVCNKCGWPFPNPHPSAKHRRAHKRVCGTIEGFKLVESEANALLTVVSDDD 64

Query: 241 KDPLFEGSGLFG----------RQVSNKSEEEEFSDAVSDFSEA 342
            D       + G          +  S +SE+E FSDAV++FSE+
Sbjct: 65  VDDKISSPKVLGGRCGDDSVGMKTKSKESEDEVFSDAVAEFSES 108


>ref|XP_002868304.1| hypothetical protein ARALYDRAFT_915472 [Arabidopsis lyrata subsp.
           lyrata] gi|297314140|gb|EFH44563.1| hypothetical protein
           ARALYDRAFT_915472 [Arabidopsis lyrata subsp. lyrata]
          Length = 787

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 21/127 (16%)
 Frame = +1

Query: 118 HICCRCGWSYANSHPSAKQRRAHKKVCGNLQGFKILKPQDEKD--PLFEGSGLFGRQ--- 282
           H+C +CGWSY N HPSAK RRAHKK+CG ++GF+I      K    L E + L   Q   
Sbjct: 17  HVCTKCGWSYPNPHPSAKNRRAHKKICGTIKGFEIFDSDKTKQNLDLQEENCLVDEQKPP 76

Query: 283 -----------VSNKSEEEEFSDAVSDFSEADL---RRSNSFGIQLSDTPNDDD--NSSR 414
                      V + SEE+ F+DAV +FS +D      + +F  + ++ P +    N+S 
Sbjct: 77  GPIVVEKADERVGDVSEEDVFTDAVCEFSRSDSFKEETATNFAAKGTENPGETQQCNNSS 136

Query: 415 TPAALKN 435
           T   +K+
Sbjct: 137 TAGVMKS 143


>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 57/203 (28%)
 Frame = +1

Query: 106 QSHG-HICCRCGWSYANSHPSAKQRRAHKKVCGNLQGFKI----------------LKPQ 234
           +SHG H+C +CGW + N HPSAK RRAHKK+CG ++G+K+                +   
Sbjct: 15  ESHGVHLCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLSASEGQPHLNGSDDEHVSDD 74

Query: 235 DEKDP----LFEGSGLFGRQVSN----KSEEEEFSDAVSDFSE----------------- 339
           D K P    L  G+   G + +     +SE+E FSDAV+DFS+                 
Sbjct: 75  DHKTPGPKSLETGNKEKGNEGNGEKIIRSEDEVFSDAVADFSDSGSIPEIKERLQDSLDS 134

Query: 340 -ADLRRSNSFGIQLSDTPND--------------DDNSSRTPAALKNVVSQLEGEAQFKY 474
            AD+ R +    + S +  D              DD+  + P   +N   +L    + + 
Sbjct: 135 GADVERVDIKETKFSGSSEDKDFNDASQLIDKSTDDSQIQNPNIFQNESVELGNMVELQG 194

Query: 475 HSTRSTVDSVVGLVSDKEVKSST 543
             +  TVD +   ++D   + ST
Sbjct: 195 QLSGPTVDPLSSSIADLRTEVST 217


>gb|AAL32591.1| Unknown protein [Arabidopsis thaliana] gi|27311933|gb|AAO00932.1|
           Unknown protein [Arabidopsis thaliana]
          Length = 784

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 32/138 (23%)
 Frame = +1

Query: 118 HICCRCGWSYANSHPSAKQRRAHKKVCGNLQGFKILKPQ---------------DEKDP- 249
           H+C +CGWSY+N HPSAK RRAHKK+CG ++GF+I   +               DE+ P 
Sbjct: 17  HVCTKCGWSYSNPHPSAKNRRAHKKICGTIKGFEIFDSEMKKENLDLPEEHSLDDEQKPP 76

Query: 250 -----LFEGSG------LFGRQVSNKSEEEEFSDAVSDFSEADL---RRSNSFGIQLSDT 387
                + E S           ++ + SEE+ F+DAV +FS +D      + +F  + ++ 
Sbjct: 77  TPSPTVVEKSAPTVVEKAANERIGDVSEEDVFTDAVCEFSRSDSFKEETATNFPAKGTEN 136

Query: 388 PNDDD--NSSRTPAALKN 435
           P +    N+S T   +K+
Sbjct: 137 PGETQQCNNSSTACEMKS 154


>ref|NP_193156.2| pentatricopeptide repeat-containing protein-like protein
           [Arabidopsis thaliana] gi|332657992|gb|AEE83392.1|
           pentatricopeptide repeat-containing protein-like protein
           [Arabidopsis thaliana]
          Length = 784

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 32/138 (23%)
 Frame = +1

Query: 118 HICCRCGWSYANSHPSAKQRRAHKKVCGNLQGFKILKPQ---------------DEKDP- 249
           H+C +CGWSY+N HPSAK RRAHKK+CG ++GF+I   +               DE+ P 
Sbjct: 17  HVCTKCGWSYSNPHPSAKNRRAHKKICGTIKGFEIFDSEMKKENLDLPEEHSLDDEQKPP 76

Query: 250 -----LFEGSG------LFGRQVSNKSEEEEFSDAVSDFSEADL---RRSNSFGIQLSDT 387
                + E S           ++ + SEE+ F+DAV +FS +D      + +F  + ++ 
Sbjct: 77  TPSPTVVEKSAPTVVEKAANERIGDVSEEDVFTDAVCEFSRSDSFKEETATNFPAKGTEN 136

Query: 388 PNDDD--NSSRTPAALKN 435
           P +    N+S T   +K+
Sbjct: 137 PGETQQCNNSSTACEMKS 154