BLASTX nr result

ID: Coptis25_contig00011960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011960
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268062.2| PREDICTED: uncharacterized protein LOC100258...   135   3e-29
ref|XP_002520634.1| hypothetical protein RCOM_1554420 [Ricinus c...   129   2e-27
dbj|BAE48657.1| hypothetical salt-inducible protein [Prunus mume]     129   2e-27
ref|XP_002303009.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_004147674.1| PREDICTED: uncharacterized protein LOC101215...   118   5e-24

>ref|XP_002268062.2| PREDICTED: uncharacterized protein LOC100258866 [Vitis vinifera]
          Length = 1258

 Score =  135 bits (340), Expect = 3e-29
 Identities = 100/253 (39%), Positives = 135/253 (53%), Gaps = 19/253 (7%)
 Frame = -2

Query: 814  DSISQTDSVEGCWGSVSDGTVRSSRHAVNSSSILAADT----LGGTDSSAVKEENQVPEL 647
            DS SQTDS+EG WGSVS GT  S++    S ++   DT    L G+ +    E++ + + 
Sbjct: 1011 DSGSQTDSLEGNWGSVSVGTGLSTQ----SDALAVVDTEALQLTGSKAPPKSEKDTLKKP 1066

Query: 646  KRMSSS-----TGIFEAPSLMTLIE-SCRGNTQQSA-SEIQAIKXXXXXXXXXXXAGLCP 488
            K  S S     + +FE PS  TL+E    GN  +SA SEIQ ++           AG  P
Sbjct: 1067 KHASVSHDSDKSDVFEPPSFATLVEPGGGGNGLKSAHSEIQTVQSQQQPNSASSQAGWFP 1126

Query: 487  SLNRANIESQGRKKNEEIIEKVANWSPGRIRAPLKSFLVEPNFESKQEAAL-HGDPRLPP 311
            SL     ESQGRKKNEE+I KV NWS G+   PLK+ LVE N E+K ++    G+     
Sbjct: 1127 SLTNVVNESQGRKKNEEVIAKVTNWSTGKQHTPLKNLLVEANTETKLKSPTPKGNSASVT 1186

Query: 310  QKDDAATTLDNDAHTEFVPPVAAPGVSTNNGLKRNVEKGWNSPARLP---SRQKRKLR-- 146
            QKD+A     +      V  +  P   T    K ++ + WNSPAR P    R+KRK++  
Sbjct: 1187 QKDEAPAKNGSATPPTKVNSIPGPEAPTTEPAK-DLGQEWNSPARYPVDSKREKRKVKGR 1245

Query: 145  --WSPFLCCLSVN 113
              W+PF+CC SVN
Sbjct: 1246 PYWAPFVCCSSVN 1258


>ref|XP_002520634.1| hypothetical protein RCOM_1554420 [Ricinus communis]
            gi|223540195|gb|EEF41770.1| hypothetical protein
            RCOM_1554420 [Ricinus communis]
          Length = 959

 Score =  129 bits (325), Expect = 2e-27
 Identities = 100/280 (35%), Positives = 134/280 (47%), Gaps = 46/280 (16%)
 Frame = -2

Query: 814  DSISQTDSVEGCWGSVSDGTVRS-------------------SRHAVNSSSILAADT--- 701
            DS SQTDS+EG WGSVS   +R                    SR   N +++L+  +   
Sbjct: 684  DSGSQTDSLEGHWGSVSGRALRRIGPRLKKFASHVDNWHINLSRLFSNHATVLSTQSDMP 743

Query: 700  ---------LGGTDSSAVKEENQVPELK------RMSSSTGIFEAPSLMTLIESCRGNTQ 566
                       G+ +SA  E   + + K      + S  + IFE PS MTL+E  R   +
Sbjct: 744  TVVDTEPMASNGSKASAEAERTDLKKTKPFLEGQQQSDKSDIFEPPSFMTLVEP-RDGDK 802

Query: 565  QSASEIQAIKXXXXXXXXXXXAGLCPSLNRANIESQGRKKNEEIIEKVANWSPGRIRAPL 386
             +ASEIQ ++           AG  PSL     ESQGRKKNEE I KV NWS G+   PL
Sbjct: 803  AAASEIQTVQNMQQPNAASLQAGWFPSLTHVVNESQGRKKNEERIAKVTNWSTGKQHTPL 862

Query: 385  KSFLVEPNFESKQEAALHGDPRLPPQKDDAATTLDNDAHTEFVPPVAAPGVSTN--NGLK 212
            KS L E N E+K +     +   P  ++D A+T D   H     P    G   N    +K
Sbjct: 863  KSLLGEANAETKSKLPNTKENLPPVVQNDEASTKD---HGSSPTPNLILGTQMNVAESIK 919

Query: 211  RNVEKGWNSPARLPS---RQKRKLR----WSPFLCCLSVN 113
            ++  K WNSPAR P+   R+KRK++    W+ F+CC SVN
Sbjct: 920  KDAGKEWNSPARYPADIKREKRKVKGRPYWAQFVCCSSVN 959


>dbj|BAE48657.1| hypothetical salt-inducible protein [Prunus mume]
          Length = 309

 Score =  129 bits (324), Expect = 2e-27
 Identities = 93/244 (38%), Positives = 123/244 (50%), Gaps = 10/244 (4%)
 Frame = -2

Query: 814 DSISQTDSVEGCWGSVSDGTVRSSRHAVNSSSILAADTLGGTDSSAVKEENQVPELKRMS 635
           DS SQTDS+EG WGSVS  +++S   AV  +    + T      S    E Q PE   M 
Sbjct: 75  DSNSQTDSLEGNWGSVSVLSIQSDAQAVPPAD---SQTSVEEKKSKAASERQYPEKSDM- 130

Query: 634 SSTGIFEAPSLMTLIESCRGNTQQS-ASEIQAIKXXXXXXXXXXXAGLCPSLNRANIESQ 458
                FEAPS MTL+E    N Q++ A+EI               AG  PS++    ES 
Sbjct: 131 -----FEAPSFMTLVEPRGVNDQKATAAEIHTAHNPEQPKPAPLQAGWFPSISHVVNESP 185

Query: 457 GRKKNEEIIEKVANWSPGRIRAPLKSFLVEPNFESKQEAALHGDPRLP-PQKDDAATTL- 284
           GRKKNEEII KV NWS G+    LK+ L E   E+K ++    + + P PQ+DD A  + 
Sbjct: 186 GRKKNEEIIAKVTNWSTGKQHTALKNLLGEAYLENKAKSPTQKESQTPAPQRDDKAVKVK 245

Query: 283 DNDAHTEFVPPVAAPGVSTNNGLKRNVEKGWNSPARLPS---RQKRKLR----WSPFLCC 125
           D       V  +  P   T    K+   K WNSPAR PS    +K+K++    W+ F+CC
Sbjct: 246 DGGPGATTVNSILGPESPTGQASKKENAKEWNSPARYPSDIKSEKKKVKGRPYWAQFVCC 305

Query: 124 LSVN 113
            SV+
Sbjct: 306 SSVH 309


>ref|XP_002303009.1| predicted protein [Populus trichocarpa] gi|222844735|gb|EEE82282.1|
            predicted protein [Populus trichocarpa]
          Length = 1025

 Score =  119 bits (298), Expect = 2e-24
 Identities = 93/256 (36%), Positives = 128/256 (50%), Gaps = 22/256 (8%)
 Frame = -2

Query: 814  DSISQTDSVEGCWGSVSDGTVRSSRHAVNSSSILAADTLGGTDSSAVKE-ENQVPELKRM 638
            DS SQTDS+E  WGSVS  + +S     +  +IL A+TL    S A+ E E    ++ R 
Sbjct: 776  DSSSQTDSLEAHWGSVSVLSTQS-----DIPTILDAETLPSNGSQALSEAEKATLKMLRA 830

Query: 637  SSST------GIFEAPSLMTLIESCRG-NTQQSASEIQAIKXXXXXXXXXXXAGLCPSLN 479
            +S T       +FEAPS MTL+E   G N +  ASE Q  +           AG  PS+ 
Sbjct: 831  ASETQHADKSDVFEAPSFMTLVEPTDGINQKADASEAQTTQNPQQPKAASVQAGWFPSIT 890

Query: 478  RANIESQGRKKNEEIIEKVANWSPGRIRAPLKS-------FLVEPNFESKQEAALHGDPR 320
                +S GRKKNEEI+ KV NWS G+   PLKS        L + N E+K ++       
Sbjct: 891  NVVNDSPGRKKNEEIMAKVTNWSTGKQHPPLKSPQHAPKILLGKANMETKSKSP--DAKE 948

Query: 319  LPPQKDDAATTLDNDAHTEFVPPVAAPGVSTNNGLKRNVEKGWNSPARLPS---RQKRKL 149
            +P  K D A    N    + + P+  P       +K + EK WN PAR P+    +K+K+
Sbjct: 949  IPVDKGDPAAN-SNGTSPKTLSPILVPQEPVGEPVK-DEEKTWNLPARHPADIKSEKKKV 1006

Query: 148  R----WSPFLCCLSVN 113
            +    W+ F+CC SVN
Sbjct: 1007 KGRPHWAQFVCCSSVN 1022


>ref|XP_004147674.1| PREDICTED: uncharacterized protein LOC101215780 [Cucumis sativus]
          Length = 1079

 Score =  118 bits (295), Expect = 5e-24
 Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 13/237 (5%)
 Frame = -2

Query: 814  DSISQTDSVEGCWGSVSDGTVRSSRHAVNS--SSILAADTLGGTDSSAVKEENQVPELKR 641
            D+ISQTDS+EG WGSVS GTV S++  + +     +      G + + +++ N  PE ++
Sbjct: 829  DAISQTDSLEGNWGSVS-GTVLSTQSDLLAVVDGEVTPQARAGAEETDLRKANAAPE-RQ 886

Query: 640  MSSSTGIFEAPSLMTLIESCRGNTQQSAS-EIQAIKXXXXXXXXXXXAGLCPSLNRANIE 464
             S  + +FE PS MTL+E   G    SA+ EIQ  +           AG  PS      +
Sbjct: 887  HSDRSDLFEPPSFMTLVEPNGGGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVAND 946

Query: 463  SQGRKKNEEIIEKVANWSPGRIRAPLKSFLVEPNFESKQEAALHGDPRLPPQKDDAATTL 284
            S GRKKNE II KV NWS G+    LK+ L +   E+KQ+++       P QKD+ A+ +
Sbjct: 947  SPGRKKNEAIIAKVTNWSAGKPHTALKNLLDDAALENKQKSS-------PTQKDNLASMI 999

Query: 283  DN--------DAHTEFVPPVAAPGVSTNNGLKRNVEKGWNSPARLPS--RQKRKLRW 143
                      D+  + V  +A P   T+  + R     WNSPAR PS  R++R+  W
Sbjct: 1000 QKDEKPMKKVDSIPKKVDSIALPNSPTSQLVNREFANEWNSPARYPSDIRRERRKGW 1056


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