BLASTX nr result

ID: Coptis25_contig00011958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011958
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis ...   399   e-109
ref|XP_002533249.1| Transmembrane protein, putative [Ricinus com...   383   e-104
ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Popu...   377   e-102
ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [C...   374   e-101
ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100

>ref|XP_002275709.1| PREDICTED: transmembrane protein 115 [Vitis vinifera]
            gi|296086036|emb|CBI31477.3| unnamed protein product
            [Vitis vinifera]
          Length = 311

 Score =  399 bits (1025), Expect = e-109
 Identities = 202/312 (64%), Positives = 235/312 (75%)
 Frame = -2

Query: 1175 MSSPLFSGGSTYFSGFTRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLIT 996
            MSS   SGG+  FSGFTRL KGLAVVI+GG V++Q FP AV+YL LIPARTIPFAWNLIT
Sbjct: 1    MSSSALSGGTGNFSGFTRLCKGLAVVIVGGHVVVQFFPSAVAYLALIPARTIPFAWNLIT 60

Query: 995  AGYIEQSLIGMVTSTLGLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYIT 816
            +GYIEQ++ G V ST+GLLF+G+LLEPIWG+REFLKFI VVNFLTSVCVF+TAIALYYIT
Sbjct: 61   SGYIEQTIYGTVVSTVGLLFLGKLLEPIWGTREFLKFIFVVNFLTSVCVFITAIALYYIT 120

Query: 815  MQETYLYMPXXXXXXXXXXXXXGIKQILPDQEFSIFPQLKIKTMWMPSLMLLLAIAVSFF 636
             QE YLYMP             GIKQI+PDQE S+F  LKI+  W+PSLMLLL+IA+SFF
Sbjct: 121  RQENYLYMPLSGFHGVLSGFLVGIKQIIPDQELSLFSLLKIRARWLPSLMLLLSIAISFF 180

Query: 635  STEAASNLPTLTFGTYMSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVAS 456
            +TE+A+ LP L FGTYM WIYLRYLQ KPET L+GDPSDEFAFSTFFP FLRP+IDP+ S
Sbjct: 181  TTESAAYLPALIFGTYMGWIYLRYLQRKPETRLKGDPSDEFAFSTFFPEFLRPVIDPIGS 240

Query: 455  VFDRLLCGRSRFSDDANGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLVPGSNT 276
            VF RL CGR   SD+  G+TLG APLPGSDP+                   E+L  G + 
Sbjct: 241  VFGRLCCGRFEISDEDRGHTLGGAPLPGSDPIEASRRRERGARALEERLAVERLTAGESA 300

Query: 275  EELSHSDAADNV 240
            +E S  DA ++V
Sbjct: 301  KE-SGRDAVEDV 311


>ref|XP_002533249.1| Transmembrane protein, putative [Ricinus communis]
            gi|223526929|gb|EEF29134.1| Transmembrane protein,
            putative [Ricinus communis]
          Length = 308

 Score =  383 bits (984), Expect = e-104
 Identities = 191/312 (61%), Positives = 234/312 (75%)
 Frame = -2

Query: 1175 MSSPLFSGGSTYFSGFTRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLIT 996
            MSSP   GG+  +SGFTRL KGLAVV++ G +++QI P ++SYL LIPA+TIPF WNLIT
Sbjct: 1    MSSPSIPGGTALYSGFTRLCKGLAVVLVAGHLIVQILPSSLSYLALIPAKTIPFGWNLIT 60

Query: 995  AGYIEQSLIGMVTSTLGLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYIT 816
            AGYIEQS+ G+V STL LL MG+LLEP+WGS+EFLKFI +VNFLTSVCVF+TAIALYYIT
Sbjct: 61   AGYIEQSIYGVVVSTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAIALYYIT 120

Query: 815  MQETYLYMPXXXXXXXXXXXXXGIKQILPDQEFSIFPQLKIKTMWMPSLMLLLAIAVSFF 636
             QE YLYMP             G+KQI+PDQE S+   L+IK  W+PSL LLL+IAVSFF
Sbjct: 121  TQENYLYMPISGFQGVLSGFLVGMKQIIPDQELSV---LRIKAKWLPSLALLLSIAVSFF 177

Query: 635  STEAASNLPTLTFGTYMSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVAS 456
            + E+ + LPT+ FGTY+SWIYLRYLQ KPET LRGDP+D+FAFSTFFP FLRP+IDP+AS
Sbjct: 178  TPESVTYLPTIIFGTYLSWIYLRYLQRKPETKLRGDPNDDFAFSTFFPEFLRPVIDPIAS 237

Query: 455  VFDRLLCGRSRFSDDANGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLVPGSNT 276
            +F R+LCGRS  S +A GYTLG APLPGSDP+                   E+L    ++
Sbjct: 238  IFHRMLCGRSETSTEAQGYTLGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSS 297

Query: 275  EELSHSDAADNV 240
            ++L   DA++NV
Sbjct: 298  DDLK-KDASENV 308


>ref|XP_002316359.1| hypothetical protein POPTRDRAFT_659857 [Populus trichocarpa]
            gi|222865399|gb|EEF02530.1| hypothetical protein
            POPTRDRAFT_659857 [Populus trichocarpa]
          Length = 275

 Score =  377 bits (969), Expect = e-102
 Identities = 181/272 (66%), Positives = 219/272 (80%)
 Frame = -2

Query: 1175 MSSPLFSGGSTYFSGFTRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLIT 996
            MSSP   GG++ F+GFT+L KGLAVV++ G +++QIFP AV+YL LIPARTIPFAWNL+T
Sbjct: 1    MSSPPILGGASLFTGFTKLCKGLAVVLVAGHIVVQIFPSAVNYLALIPARTIPFAWNLLT 60

Query: 995  AGYIEQSLIGMVTSTLGLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYIT 816
            AGYIEQS+ G+V STL LL MG+LLEP+WGS+EFLKFI +VNFLTSVCVF+TAI+LYYIT
Sbjct: 61   AGYIEQSIYGVVASTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLTSVCVFITAISLYYIT 120

Query: 815  MQETYLYMPXXXXXXXXXXXXXGIKQILPDQEFSIFPQLKIKTMWMPSLMLLLAIAVSFF 636
             QE YLYMP             G KQI+PDQE S+   L++K  W PSLMLL+AI +SFF
Sbjct: 121  RQENYLYMPISGFQGILAGFLVGTKQIIPDQELSL---LRLKAKWFPSLMLLIAIVISFF 177

Query: 635  STEAASNLPTLTFGTYMSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVAS 456
            + E+A  LPT+ FGTYMSWIYLRY   KPET LRGDPSD+FAFS+FFP FLRP+IDP+AS
Sbjct: 178  TAESAKYLPTIIFGTYMSWIYLRYFHRKPETKLRGDPSDDFAFSSFFPEFLRPVIDPIAS 237

Query: 455  VFDRLLCGRSRFSDDANGYTLGSAPLPGSDPV 360
            +F R+LCGR   S +A+G+TLG APLPGSDP+
Sbjct: 238  IFHRMLCGRFETSTEAHGHTLGGAPLPGSDPI 269


>ref|XP_004143801.1| PREDICTED: transmembrane protein 115-like [Cucumis sativus]
            gi|449529888|ref|XP_004171930.1| PREDICTED: transmembrane
            protein 115-like [Cucumis sativus]
          Length = 308

 Score =  374 bits (961), Expect = e-101
 Identities = 189/312 (60%), Positives = 231/312 (74%)
 Frame = -2

Query: 1175 MSSPLFSGGSTYFSGFTRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLIT 996
            MS+P   GGS  F+GFT+L KG+AVV+IGG +L+Q+FP  V+YL LIPARTIPFAWNL+T
Sbjct: 1    MSTPSVPGGSGSFTGFTKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLT 60

Query: 995  AGYIEQSLIGMVTSTLGLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYIT 816
            AGYIEQS+ G+V ST+GLLF+G+LLEPIWGSREFLKFI VVNFLTS+CVF+TAIALYYIT
Sbjct: 61   AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 815  MQETYLYMPXXXXXXXXXXXXXGIKQILPDQEFSIFPQLKIKTMWMPSLMLLLAIAVSFF 636
             +E+YLY+P             GIKQ++PDQE    P LK+K  W+PSL +LL+IAVSF+
Sbjct: 121  QEESYLYLPVSGFYGILAGFLVGIKQMIPDQE---LPVLKLKAKWLPSLAVLLSIAVSFW 177

Query: 635  STEAASNLPTLTFGTYMSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVAS 456
            +T AA+ LPT+ FGTY+SWIYLRY Q KPE  L+GDPSD+FAFSTFFP  LRP+IDP+AS
Sbjct: 178  TTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIAS 237

Query: 455  VFDRLLCGRSRFSDDANGYTLGSAPLPGSDPVXXXXXXXXXXXXXXXXXXXEKLVPGSNT 276
            +F R+LCGRS   D+A  YT   APLPGSDPV                   E+L    + 
Sbjct: 238  IFHRMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSA 297

Query: 275  EELSHSDAADNV 240
            +E S  DA +NV
Sbjct: 298  QE-SGKDATENV 308


>ref|XP_002311100.1| predicted protein [Populus trichocarpa] gi|222850920|gb|EEE88467.1|
            predicted protein [Populus trichocarpa]
          Length = 275

 Score =  371 bits (953), Expect = e-100
 Identities = 182/272 (66%), Positives = 217/272 (79%)
 Frame = -2

Query: 1175 MSSPLFSGGSTYFSGFTRLSKGLAVVIIGGSVLLQIFPPAVSYLTLIPARTIPFAWNLIT 996
            MSSP   GG++ F+GFT+L KGLAVV++   +L+QI PPAV+YL LIPARTIPF WNLIT
Sbjct: 1    MSSPPILGGASLFTGFTKLCKGLAVVLVTCHILVQILPPAVNYLALIPARTIPFVWNLIT 60

Query: 995  AGYIEQSLIGMVTSTLGLLFMGRLLEPIWGSREFLKFILVVNFLTSVCVFVTAIALYYIT 816
            AGYIEQS+ G+V STL LL MG+LLEP+WGS+EFLKFI +VNFL S+CVF+TAI+LYYIT
Sbjct: 61   AGYIEQSIYGVVASTLCLLIMGKLLEPVWGSKEFLKFIFIVNFLISICVFITAISLYYIT 120

Query: 815  MQETYLYMPXXXXXXXXXXXXXGIKQILPDQEFSIFPQLKIKTMWMPSLMLLLAIAVSFF 636
             QE YLYMP             GIKQI+PDQE S+   L+IK  W PSLMLL+AIA+SFF
Sbjct: 121  RQENYLYMPISGFQGILAGFLVGIKQIIPDQELSL---LRIKAKWFPSLMLLIAIAISFF 177

Query: 635  STEAASNLPTLTFGTYMSWIYLRYLQSKPETALRGDPSDEFAFSTFFPTFLRPLIDPVAS 456
            + E+A+ LPTL FGTYMSWIYLRY Q KPET LRGDPSD+FAFS+FFP  LRP+IDP+AS
Sbjct: 178  TAESAAYLPTLIFGTYMSWIYLRYFQRKPETKLRGDPSDDFAFSSFFPESLRPIIDPIAS 237

Query: 455  VFDRLLCGRSRFSDDANGYTLGSAPLPGSDPV 360
            +F R+LCGR   S +A+G TLG A LPGSDP+
Sbjct: 238  IFHRMLCGRFETSTEAHGDTLGDASLPGSDPI 269


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