BLASTX nr result

ID: Coptis25_contig00011956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011956
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO70202.1| putative ammonium transporter AMT1;3, partial [Al...    96   1e-17
gb|AFU34590.1| ammonium transporter 1;3 [Alternanthera philoxero...    96   1e-17
ref|XP_002525633.1| ammonium transporter, putative [Ricinus comm...    95   2e-17
dbj|BAJ23885.1| putative ammonium transporter, partial [Camellia...    83   7e-14
gb|AEZ06606.1| AMT1;2 [Pyrus communis]                                 83   9e-14

>gb|AFO70202.1| putative ammonium transporter AMT1;3, partial [Alternanthera
           philoxeroides]
          Length = 412

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 63/131 (48%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = +2

Query: 50  RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 190
           R    TTL G    IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 206 RTAVTTTLSGSMAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 261

Query: 191 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 304
                                 F DPLEA+QLHGGCGAWGLIFTGLFAKEEFI+Q Y   
Sbjct: 262 IICGFVAAWVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDSG 321

Query: 305 QG--SRQFGVL 331
           +G  SR +G+L
Sbjct: 322 KGGISRSYGLL 332


>gb|AFU34590.1| ammonium transporter 1;3 [Alternanthera philoxeroides]
          Length = 462

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 63/131 (48%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = +2

Query: 50  RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 190
           R    TTL G    IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 256 RTAVTTTLSGSMAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 311

Query: 191 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 304
                                 F DPLEA+QLHGGCGAWGLIFTGLFAKEEFI+Q Y   
Sbjct: 312 IICGFVAAWVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDSG 371

Query: 305 QG--SRQFGVL 331
           +G  SR +G+L
Sbjct: 372 KGGISRSYGLL 382


>ref|XP_002525633.1| ammonium transporter, putative [Ricinus communis]
           gi|223535069|gb|EEF36751.1| ammonium transporter,
           putative [Ricinus communis]
          Length = 466

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 61/131 (46%), Positives = 67/131 (51%), Gaps = 37/131 (28%)
 Frame = +2

Query: 50  RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 190
           R    TTL G T  IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 256 RTAVTTTLAGSTAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 311

Query: 191 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 304
                                 F DPLEA QLHGGCGAWGLIFTGLFAKEEF++Q Y   
Sbjct: 312 IVCGFCAAWILIGLNILALKLQFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVIQAYESG 371

Query: 305 QGS--RQFGVL 331
           +    R +G+L
Sbjct: 372 ESGVVRPYGIL 382


>dbj|BAJ23885.1| putative ammonium transporter, partial [Camellia sinensis]
          Length = 311

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 55/141 (39%), Positives = 71/141 (50%), Gaps = 31/141 (21%)
 Frame = +2

Query: 2   GQYLGTR*SWSSGASIRELFVTTLVGLTIDIVTLAI-WTASNNWSLG--CNGVLGGFVAI 172
           G Y G    WS+    R    TTL G T  + TL +    S +W++   CNG+LGGF AI
Sbjct: 91  GSYYG---QWSAVG--RTAVTTTLAGSTAALTTLFLNRVVSGHWNVTDVCNGLLGGFAAI 145

Query: 173 TSGCLV----------------------------FVDPLEAMQLHGGCGAWGLIFTGLFA 268
           T+GC V                            F DPLEA QLHGGCGAWG+IFT LFA
Sbjct: 146 TAGCSVVEPWAAVICGLVAALVLIGCNKVAERVKFDDPLEAAQLHGGCGAWGVIFTALFA 205

Query: 269 KEEFIVQTYIMMQGSRQFGVL 331
            E+++ + Y   +  R +G+L
Sbjct: 206 SEKYVNEVY-PGKSDRPYGLL 225


>gb|AEZ06606.1| AMT1;2 [Pyrus communis]
          Length = 504

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 56/140 (40%), Positives = 71/140 (50%), Gaps = 31/140 (22%)
 Frame = +2

Query: 2   GQYLGTR*SWSSGASIRELFVTTLVGLTIDIVTL-AIWTASNNWSL--GCNGVLGGFVAI 172
           G Y G    WS  A  R    TTL G T  + TL +    + +W++   CNG+LGGF AI
Sbjct: 282 GTYYG---QWS--AIGRTAVTTTLAGCTAALTTLFSKRLLAGHWNVLDVCNGLLGGFAAI 336

Query: 173 TSGCLV----------------------------FVDPLEAMQLHGGCGAWGLIFTGLFA 268
           TSGC V                            + DPLEA QLHGGCGAWGL+FTGLFA
Sbjct: 337 TSGCSVAEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAWGLVFTGLFA 396

Query: 269 KEEFIVQTYIMMQGSRQFGV 328
            E+++ + Y    G R +G+
Sbjct: 397 TEKYVNEVYSGRSG-RPYGL 415


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