BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011946
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ...    57   2e-06
ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 789

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 148 GRSEGDRGFSGDRQMRGDNRNYKGGKKHG-IPNAHVPSEIKNPDQVRKRR 2
           G +E    FSGD ++RG+NR +KGGKK   +PNA+V SEIK+ +QVRK R
Sbjct: 708 GNAEQTSTFSGDNRLRGNNRKFKGGKKQNFMPNANVRSEIKSLEQVRKER 757


>ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|222856918|gb|EEE94465.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/73 (41%), Positives = 40/73 (54%)
 Frame = -2

Query: 220 GRSEGDRGFSGNRQMRGDNRNYRGGRSEGDRGFSGDRQMRGDNRNYKGGKKHGIPNAHVP 41
           G +E    FSGNRQ+RG+NRN+RG +                       K+H +PNA+V 
Sbjct: 94  GNAEESTSFSGNRQLRGNNRNFRGSK-----------------------KQHSLPNANVR 130

Query: 40  SEIKNPDQVRKRR 2
           SEIK+ +QVRK R
Sbjct: 131 SEIKDLEQVRKER 143