BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011938
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...    58   7e-07
ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like...    58   9e-07
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like...    58   9e-07
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...    55   5e-06

>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
 Frame = +1

Query: 190 EVIDILSPSPCQ----TSKLQNTNDPLVDVIYVSESETDTSPEYARKARELRLFIAIIKT 357
           EVID+ SPSP       S+ Q  ND   +VI +SESE + SPE+ARKAR LR+FIA I+ 
Sbjct: 479 EVIDLCSPSPVARTRTVSRCQRVNDQHSEVIDLSESENEMSPEHARKARALRMFIASIRD 538

Query: 358 DVS 366
           D+S
Sbjct: 539 DMS 541


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
 Frame = +1

Query: 193 VIDILSPSPCQ---TSKLQNTNDPLVDVIYVSESETDTSPEYARKARELRLFIAIIKTDV 363
           VID+LSPSP +   +SK   ++D  +DVI +S+SE + SPE+ +KA+ELR+F+A I+ ++
Sbjct: 511 VIDLLSPSPLKPSNSSKFHPSSDQNIDVINLSDSENEVSPEHKQKAKELRMFLASIRNEI 570


>ref|XP_004173761.1| PREDICTED: flap endonuclease GEN-like 2-like, partial [Cucumis
           sativus]
          Length = 294

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = +1

Query: 190 EVIDILSPSPC----QTSKLQNTNDPLVDVIYVSESETDTSPEYARKARELRLFIAIIK 354
           EVID+LSPSP       SK Q      +DVI +S++E D SPE+ RKARELR F+A +K
Sbjct: 234 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 292


>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
          Length = 563

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = +1

Query: 190 EVIDILSPSPC----QTSKLQNTNDPLVDVIYVSESETDTSPEYARKARELRLFIAIIK 354
           EVID+LSPSP       SK Q      +DVI +S++E D SPE+ RKARELR F+A +K
Sbjct: 503 EVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
 Frame = +1

Query: 190 EVIDILSPSPCQTSKL----QNTNDPLVDVIYVSESETDTSPEYARKARELRLFIAIIKT 357
           E+ID+LSPSP + S L    Q ++D  ++VI +S+SE D S E  +KA+ELRLF+A I+ 
Sbjct: 526 EIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKELRLFLASIRN 585

Query: 358 DV 363
           ++
Sbjct: 586 EI 587