BLASTX nr result

ID: Coptis25_contig00011934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011934
         (1941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28019.3| unnamed protein product [Vitis vinifera]              501   e-139
ref|XP_002280568.1| PREDICTED: uncharacterized protein LOC100247...   483   e-133
ref|XP_004139353.1| PREDICTED: uncharacterized protein LOC101211...   479   e-133
ref|XP_002324440.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera]   456   e-125

>emb|CBI28019.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  501 bits (1290), Expect = e-139
 Identities = 263/418 (62%), Positives = 306/418 (73%)
 Frame = -2

Query: 1268 VTETRMRSLKKSFIVNNSSETIKTTNNRIHCFGASPSIFQGLVPPLFCLRLAWKLTCVCW 1089
            V E R   LK+   VN  S+   +     + + ++  +FQGL+ P F +RLAW+L     
Sbjct: 113  VCERRAFDLKEESHVNIRSQIAGSN----YSYQSTSFLFQGLLLPFFGMRLAWRLAWASS 168

Query: 1088 RCFFCHIRHIQMQVRR*KVKINFSNWRLKVKILVVYARLDLFQCFSHSLNKNGSNKNLCC 909
            R  FC +R +Q++VR                                             
Sbjct: 169  RYSFCFVRCMQIRVR--------------------------------------------- 183

Query: 908  VCSLFSRLHKTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLL 729
              S+ SR+  TLHGSSDDIGWLQ  PGV PVEDGT RF+ELL+ IRNGKHTLPNS+VYLL
Sbjct: 184  --SIISRVQTTLHGSSDDIGWLQCTPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYLL 241

Query: 728  IPGLFSNLSPLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHV 549
            IPGLF N  PLYFVNTK+FFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V
Sbjct: 242  IPGLFGNHGPLYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKCV 301

Query: 548  MLLGHSKGGVDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRV 369
            +LLGHSKGGVDAAAALS+YW++LKDKVAGLALVQSPYGGTP+ASD LREGQIAD+ETRR+
Sbjct: 302  ILLGHSKGGVDAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIADRETRRI 361

Query: 368  MEFLICKLIKGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIA 189
            +EFLICKLIKGD++AL+DLTYEKR+EFI  HKLPE IPLISF+SEAS AP VLATMSH+A
Sbjct: 362  LEFLICKLIKGDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVLATMSHVA 421

Query: 188  HAELPWLPLPRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCR 15
            HAELP LPLPRFG    +S     KVPVVIP++A +++ ALHL+LRYGEKSDGLVTCR
Sbjct: 422  HAELPLLPLPRFGSK--ESDVQGCKVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCR 477


>ref|XP_002280568.1| PREDICTED: uncharacterized protein LOC100247423 [Vitis vinifera]
          Length = 431

 Score =  483 bits (1242), Expect = e-133
 Identities = 236/295 (80%), Positives = 264/295 (89%)
 Frame = -2

Query: 899 LFSRLHKTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPG 720
           + SR+  TLHGSSDDIGWLQ  PGV PVEDGT RF+ELL+ IRNGKHTLPNS+VYLLIPG
Sbjct: 80  IISRVQTTLHGSSDDIGWLQCTPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYLLIPG 139

Query: 719 LFSNLSPLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLL 540
           LF N  PLYFVNTK+FFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LL
Sbjct: 140 LFGNHGPLYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKCVILL 199

Query: 539 GHSKGGVDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEF 360
           GHSKGGVDAAAALS+YW++LKDKVAGLALVQSPYGGTP+ASD LREGQIAD+ETRR++EF
Sbjct: 200 GHSKGGVDAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIADRETRRILEF 259

Query: 359 LICKLIKGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAE 180
           LICKLIKGD++AL+DLTYEKR+EFI  HKLPE IPLISF+SEAS AP VLATMSH+AHAE
Sbjct: 260 LICKLIKGDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVLATMSHVAHAE 319

Query: 179 LPWLPLPRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCR 15
           LP LPLPRFG    +S     KVPVVIP++A +++ ALHL+LRYGEKSDGLVTCR
Sbjct: 320 LPLLPLPRFGSK--ESDVQGCKVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCR 372


>ref|XP_004139353.1| PREDICTED: uncharacterized protein LOC101211085 [Cucumis sativus]
            gi|449516111|ref|XP_004165091.1| PREDICTED:
            uncharacterized protein LOC101227060 [Cucumis sativus]
          Length = 515

 Score =  479 bits (1234), Expect = e-133
 Identities = 245/391 (62%), Positives = 284/391 (72%), Gaps = 1/391 (0%)
 Frame = -2

Query: 1184 IHCFGASPSIFQGLVPPLFCLRLAWKL-TCVCWRCFFCHIRHIQMQVRR*KVKINFSNWR 1008
            I+ +  +  IF+GL+ PL+ L+   KL +C    CF C                      
Sbjct: 116  IYSYEVASPIFEGLMLPLYGLQFVQKLASCSLRNCFSC---------------------- 153

Query: 1007 LKVKILVVYARLDLFQCFSHSLNKNGSNKNLCCVCSLFSRLHKTLHGSSDDIGWLQRAPG 828
                           QC               C+ ++  R+ KTL GSS+DIGWLQ  PG
Sbjct: 154  --------------IQCVE------------LCLYNIMCRIRKTLLGSSNDIGWLQTTPG 187

Query: 827  VPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLFSNLSPLYFVNTKRFFSKMGLAC 648
            +PPV DGT RF+ELL  IRNG+H LPNSFVYLLIPGLFSN  PLYFV TK+FFSKMGL C
Sbjct: 188  MPPVVDGTARFLELLSDIRNGEHRLPNSFVYLLIPGLFSNHGPLYFVGTKKFFSKMGLTC 247

Query: 647  HIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGHSKGGVDAAAALSIYWTELKDKV 468
            HIAKIHSEA+VEHNAWELK Y+EELYWGSGK VMLLGHSKGGVDAAAALSIY  ELKDKV
Sbjct: 248  HIAKIHSEASVEHNAWELKEYVEELYWGSGKRVMLLGHSKGGVDAAAALSIYCNELKDKV 307

Query: 467  AGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLICKLIKGDMRALDDLTYEKRKEF 288
            AGLALVQSPYGGTP+ASDFLR+GQIAD+ETR++ME LICK+IKGD+RAL+DLTY+KRKEF
Sbjct: 308  AGLALVQSPYGGTPLASDFLRDGQIADKETRKIMELLICKIIKGDIRALEDLTYDKRKEF 367

Query: 287  ITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELPWLPLPRFGMAFFDSIQASYKVP 108
            I  H LPE++P++SF+SEA  APGVLATM+HIAHAELPWLPLPR        +Q   +VP
Sbjct: 368  IMNHNLPENVPILSFHSEAQVAPGVLATMTHIAHAELPWLPLPRSWTESDTVVQGGRRVP 427

Query: 107  VVIPLAAAMAVSALHLKLRYGEKSDGLVTCR 15
            VVIPL+A MA+ ALHL+LRYGEKSDGLVTCR
Sbjct: 428  VVIPLSAVMALCALHLQLRYGEKSDGLVTCR 458


>ref|XP_002324440.1| predicted protein [Populus trichocarpa] gi|222865874|gb|EEF03005.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  465 bits (1197), Expect = e-128
 Identities = 229/293 (78%), Positives = 259/293 (88%)
 Frame = -2

Query: 893 SRLHKTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLPNSFVYLLIPGLF 714
           SR+ KTL GSSDDIGWLQ    + PVEDGT +F+  +   +NG+H LPNSFVYLLIPGLF
Sbjct: 3   SRVRKTLRGSSDDIGWLQHTRDMAPVEDGTDQFLFDISD-KNGEHNLPNSFVYLLIPGLF 61

Query: 713 SNLSPLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELYWGSGKHVMLLGH 534
           SN  PLYFV TKRFFSKMGLACHIAKIHSEA+VEHNAWELK YIEELYWGSGK V+LLGH
Sbjct: 62  SNHGPLYFVGTKRFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKRVILLGH 121

Query: 533 SKGGVDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIADQETRRVMEFLI 354
           SKGGVDAAAALSIY ++LK+KVAGLALVQSPY GTPIASD LREGQIAD+ETRR+ME LI
Sbjct: 122 SKGGVDAAAALSIYSSDLKNKVAGLALVQSPYAGTPIASDILREGQIADKETRRIMELLI 181

Query: 353 CKLIKGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVLATMSHIAHAELP 174
           CK+IKGD+RAL+DLTY+KR+EFI+KH+L + IPLISF+SEAS APGVLATM+HIAHAELP
Sbjct: 182 CKIIKGDIRALEDLTYDKRREFISKHQLSKEIPLISFHSEASIAPGVLATMTHIAHAELP 241

Query: 173 WLPLPRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDGLVTCR 15
           WLPLP+FG    D  QA ++VPVVIP++AAMAV ALHL+LRYGEKSDGLVTCR
Sbjct: 242 WLPLPKFGSEASDDFQAGHQVPVVIPVSAAMAVCALHLQLRYGEKSDGLVTCR 294


>emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera]
          Length = 1908

 Score =  456 bits (1172), Expect = e-125
 Identities = 229/305 (75%), Positives = 258/305 (84%)
 Frame = -2

Query: 929  SNKNLCCVCSLFSRLHKTLHGSSDDIGWLQRAPGVPPVEDGTTRFMELLQGIRNGKHTLP 750
            S  + C V  +  R+   L GS          PGV PVEDGT RF+ELL+ IRNGKHTLP
Sbjct: 1556 SRYSFCFVRCMQIRVRSALLGS----------PGVAPVEDGTARFLELLREIRNGKHTLP 1605

Query: 749  NSFVYLLIPGLFSNLSPLYFVNTKRFFSKMGLACHIAKIHSEAAVEHNAWELKHYIEELY 570
            NS+VYLLIPGLF N  PLYFVNTK+FFSKMGLACHIAKIHSEA+VEHNAWELK YIEELY
Sbjct: 1606 NSYVYLLIPGLFXNHGPLYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELY 1665

Query: 569  WGSGKHVMLLGHSKGGVDAAAALSIYWTELKDKVAGLALVQSPYGGTPIASDFLREGQIA 390
            WGSGK V+LLGHSKGGVDAAAALS+YW++LKDKVAGLALVQSPYGGTP+ASD LREGQIA
Sbjct: 1666 WGSGKCVILLGHSKGGVDAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIA 1725

Query: 389  DQETRRVMEFLICKLIKGDMRALDDLTYEKRKEFITKHKLPEHIPLISFYSEASTAPGVL 210
            D+ETRR++EFLICKLIKGD++AL+DLTYEKR+EFI  HKLPE IPLISF+SEAS AP VL
Sbjct: 1726 DRETRRILEFLICKLIKGDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVL 1785

Query: 209  ATMSHIAHAELPWLPLPRFGMAFFDSIQASYKVPVVIPLAAAMAVSALHLKLRYGEKSDG 30
            ATMSH+AHAELP LPLPRFG    D +Q   KVPVVIP++A +++ ALHL+LRYGEKSDG
Sbjct: 1786 ATMSHVAHAELPLLPLPRFGSKESD-VQEGCKVPVVIPISAVLSLCALHLQLRYGEKSDG 1844

Query: 29   LVTCR 15
            LVTCR
Sbjct: 1845 LVTCR 1849


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