BLASTX nr result

ID: Coptis25_contig00011901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011901
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805...   253   8e-65
ref|XP_002510369.1| conserved hypothetical protein [Ricinus comm...   243   6e-62
ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813...   233   8e-59
ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|2...   228   2e-57
ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|2...   219   7e-55

>ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805646 [Glycine max]
          Length = 1886

 Score =  253 bits (645), Expect = 8e-65
 Identities = 146/299 (48%), Positives = 189/299 (63%)
 Frame = -3

Query: 1113 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 934
            TSLR+I KEQE   +SA  ++P+ PP+K      T  + +++ ++ SS +  ASPI+I+ 
Sbjct: 1592 TSLRDILKEQERKGSSAIPVSPMPPPQKSQPPQSTWSSASSRSISASSPSKAASPIQINS 1651

Query: 933  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLXXXXXX 754
             AS QSK + +DDLFWGP DQS Q   QSGFP LV+  SRG+K++P++G   GL      
Sbjct: 1652 QAS-QSKHKGDDDLFWGPMDQSKQDTKQSGFPQLVSQGSRGSKNVPLKGNSPGLLTRQKS 1710

Query: 753  XXXXXTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 574
                 T  FL+SS  +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE C
Sbjct: 1711 VSGKPTERFLASSPASSQSVLKLKKDAMTRHSEATDFRDWCENECVRLIGTKDTSFLEFC 1770

Query: 573  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 394
            L Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQS +D K +  G   
Sbjct: 1771 LKQSRSEAEMLLIENLGSYDPDHQFIDKFLNYKELLPSDVLDIAFQSRNDKKVTGYGVEG 1830

Query: 393  VDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAEN 217
              +      DVD  E +S  G            KVS S+LGFNVVSNRI+MGEIQ+ E+
Sbjct: 1831 TASVSADILDVDYTEGSSKGGG---KKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSVED 1886


>ref|XP_002510369.1| conserved hypothetical protein [Ricinus communis]
            gi|223551070|gb|EEF52556.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1798

 Score =  243 bits (620), Expect = 6e-62
 Identities = 139/301 (46%), Positives = 184/301 (61%), Gaps = 2/301 (0%)
 Frame = -3

Query: 1113 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 934
            TSLR+IQKEQE   +S Q   P+  P+K   +     +GA+  L+ SS +  ASP++I+ 
Sbjct: 1498 TSLRDIQKEQEKKFSSVQPQNPISTPQKPQPSQVAHASGASWSLSASSPSKAASPMQINS 1557

Query: 933  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLXXXXXX 754
             ++ QSK + +DDLFWGP DQS Q+  QS FP LV+  S G K+ PV+G+  G       
Sbjct: 1558 HSALQSKYKGDDDLFWGPVDQSKQETKQSEFPHLVSQGSWGAKNTPVKGSPSGSINRQKS 1617

Query: 753  XXXXXTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 574
                     LSSS  +A+S  +G++    + SEA DFRDWC+ E  RLTG+ DTS LE C
Sbjct: 1618 IGGRQAERTLSSSPASAQSSLKGKRDAMNKHSEAMDFRDWCESECVRLTGTRDTSVLEFC 1677

Query: 573  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 394
            L Q   EAE+LLKENLG  DPD  FIDK L+YK LLPADVLE+AFQS +D   +  G  +
Sbjct: 1678 LKQSRSEAELLLKENLGPNDPDDEFIDKFLNYKELLPADVLEIAFQSRNDRMATGLGARD 1737

Query: 393  VDTNIISDRDVDSAEVASHIGS--XXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAE 220
            ++++ +  RD D    A   GS             KVS ++LGF+VVSNRI+MGEIQT E
Sbjct: 1738 MNSDNVGSRDFDHDFAAGADGSSKGGGKKKGKKGKKVSPAVLGFSVVSNRIMMGEIQTVE 1797

Query: 219  N 217
            +
Sbjct: 1798 D 1798


>ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813188 [Glycine max]
          Length = 1781

 Score =  233 bits (593), Expect = 8e-59
 Identities = 142/302 (47%), Positives = 185/302 (61%), Gaps = 3/302 (0%)
 Frame = -3

Query: 1113 TSLREIQKEQEHMSTSAQQM--APVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEI 940
            TSLR+I KEQE   +SA  +  +P+ PP+K      T  T +++ ++ SS +  ASPI+I
Sbjct: 1483 TSLRDILKEQERKGSSALPVTVSPMPPPQKSQPPQSTWSTVSSRSISASSPSKNASPIQI 1542

Query: 939  SGLASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLXXXX 760
            +  AS QSK + +DDLFWGP +QS Q   QS FP L +  S G+K+ P++G   GL    
Sbjct: 1543 NSQAS-QSKYKGDDDLFWGPIEQSKQDTKQSDFPQLASQGSWGSKNGPLKGNSPGLLTRQ 1601

Query: 759  XXXXXXXTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLE 580
                   T   L+SS  +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE
Sbjct: 1602 KSVSGKPTERSLASSPASSQSVLKLKKDAMTRHSEAMDFRDWCENECVRLIGTKDTSFLE 1661

Query: 579  LCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQ-SHDDPKTSKPG 403
             CL Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQ S +D K ++ G
Sbjct: 1662 FCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSSRNDKKVTRHG 1721

Query: 402  CGNVDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTA 223
                 +     +DVD  E  S  G            KVS S+LGFNVVSNRI+MGEIQ+ 
Sbjct: 1722 AAGTASANADIQDVDYTEGGSSKGG--GKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSV 1779

Query: 222  EN 217
            E+
Sbjct: 1780 ED 1781


>ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|222839392|gb|EEE77729.1|
            predicted protein [Populus trichocarpa]
          Length = 885

 Score =  228 bits (581), Expect = 2e-57
 Identities = 136/299 (45%), Positives = 176/299 (58%)
 Frame = -3

Query: 1113 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 934
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 590  TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 649

Query: 933  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLXXXXXX 754
             AS QSK + +D+LFWGP DQS Q+  QS FP + +  S GTK+ PV+G  V        
Sbjct: 650  RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 709

Query: 753  XXXXXTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 574
                   + LSSST   +S  +G++    + SEA +FR WC+ E  RL G+ DTSFLE C
Sbjct: 710  VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKDTSFLEYC 769

Query: 573  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 394
            L Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +D KTS     +
Sbjct: 770  LKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQNDWKTSGISAKD 829

Query: 393  VDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAEN 217
            V  +     D D  + +   GS           KV+ S+LGFNVVSNRI+MGEIQT E+
Sbjct: 830  VTFDNAGVEDYDREDGSGKGGS---KKKGKKGKKVNPSVLGFNVVSNRIMMGEIQTLED 885


>ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|222843601|gb|EEE81148.1|
            predicted protein [Populus trichocarpa]
          Length = 1846

 Score =  219 bits (559), Expect = 7e-55
 Identities = 136/310 (43%), Positives = 176/310 (56%), Gaps = 11/310 (3%)
 Frame = -3

Query: 1113 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 934
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 1540 TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 1599

Query: 933  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLXXXXXX 754
             AS QSK + +D+LFWGP DQS Q+  QS FP + +  S GTK+ PV+G  V        
Sbjct: 1600 RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 1659

Query: 753  XXXXXTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSN-------- 598
                   + LSSST   +S  +G++    + SEA +FR WC+ E  RL G+         
Sbjct: 1660 VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKVLSDAMES 1719

Query: 597  ---DTSFLELCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHD 427
               DTSFLE CL Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +
Sbjct: 1720 LVIDTSFLEYCLKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQN 1779

Query: 426  DPKTSKPGCGNVDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRI 247
            D KTS     +V  +     D D  + +   GS           KV+ S+LGFNVVSNRI
Sbjct: 1780 DWKTSGISAKDVTFDNAGVEDYDREDGSGKGGS---KKKGKKGKKVNPSVLGFNVVSNRI 1836

Query: 246  LMGEIQTAEN 217
            +MGEIQT E+
Sbjct: 1837 MMGEIQTLED 1846


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