BLASTX nr result

ID: Coptis25_contig00011889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011889
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319590.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|ABK93956.1| unknown [Populus trichocarpa]                           73   2e-11
gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]       71   9e-11
ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|1...    71   9e-11
gb|ADV16367.1| acyl carrier protein 3 [Helianthus annuus]              70   2e-10

>ref|XP_002319590.1| predicted protein [Populus trichocarpa] gi|222857966|gb|EEE95513.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = -1

Query: 454 TVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAFGISVEEESA 275
           T++ V +++ + L  +  +  +   +  T+ + SL     VEIVMGLEEAFGISVEEESA
Sbjct: 61  TIDKVCEIVKKQLALSDEIPVTGESKFTTLGADSLDT---VEIVMGLEEAFGISVEEESA 117

Query: 274 QSIATAQDAADLIEKIIETK 215
           QSIAT QDAADLIEK++E K
Sbjct: 118 QSIATVQDAADLIEKLVEKK 137


>gb|ABK93956.1| unknown [Populus trichocarpa]
          Length = 137

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = -1

Query: 454 TVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAFGISVEEESA 275
           T++ V +++ + L  +  +  +   +  T+ + SL     VEIVMGLEEAFGISVEEESA
Sbjct: 60  TIDKVCEIVKKQLALSDEIPVTGESKFTTLGADSLDT---VEIVMGLEEAFGISVEEESA 116

Query: 274 QSIATAQDAADLIEKIIETK 215
           QSIAT QDAADLIEK++E K
Sbjct: 117 QSIATVQDAADLIEKLVEKK 136


>gb|ABK96338.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = -1

Query: 364 TSVSLSNKMEVEIVMGLEEAFGISVEEESAQSIATAQDAADLIEKIIETK 215
           T++   +   VEIVMGLEEAFGISVEEESAQSIAT QDAADLIEK++E K
Sbjct: 87  TALGADSLDTVEIVMGLEEAFGISVEEESAQSIATVQDAADLIEKLVEKK 136


>ref|XP_002328387.1| predicted protein [Populus trichocarpa] gi|118481393|gb|ABK92639.1|
           unknown [Populus trichocarpa]
           gi|118483648|gb|ABK93718.1| unknown [Populus
           trichocarpa] gi|222838102|gb|EEE76467.1| predicted
           protein [Populus trichocarpa]
          Length = 137

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = -1

Query: 364 TSVSLSNKMEVEIVMGLEEAFGISVEEESAQSIATAQDAADLIEKIIETK 215
           T++   +   VEIVMGLEEAFGISVEEESAQSIAT QDAADLIEK++E K
Sbjct: 87  TALGADSLDTVEIVMGLEEAFGISVEEESAQSIATVQDAADLIEKLVEKK 136


>gb|ADV16367.1| acyl carrier protein 3 [Helianthus annuus]
          Length = 139

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/80 (52%), Positives = 53/80 (66%)
 Frame = -1

Query: 454 TVNLVLKVLSRVLRFTQSLS*S*RCEVHTVTSVSLSNKMEVEIVMGLEEAFGISVEEESA 275
           TVN V  ++ + L   +  + +   +  T+ + SL     VEIVMGLEE FGISVEEESA
Sbjct: 63  TVNKVCNIVRKQLAVPEDTAVTGESKFATLGADSLDT---VEIVMGLEEEFGISVEEESA 119

Query: 274 QSIATAQDAADLIEKIIETK 215
           QSIAT QDAADLIEK++  K
Sbjct: 120 QSIATVQDAADLIEKLVSKK 139


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