BLASTX nr result

ID: Coptis25_contig00011885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011885
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251...    99   3e-19
ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251...    99   3e-19
ref|XP_004137933.1| PREDICTED: uncharacterized protein LOC101204...    97   1e-18
ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CBI30520.3| unnamed protein product [Vitis vinifera]               92   4e-17

>ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251163 isoform 2 [Vitis
           vinifera]
          Length = 437

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 7/93 (7%)
 Frame = +3

Query: 285 PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTL 443
           PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTL
Sbjct: 49  PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 444 LSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVE 542
           LSERG  +D ++KL+ I+ L  SHLGVRVA++E
Sbjct: 109 LSERGAFDDAIDKLQIIQGLAESHLGVRVASME 141


>ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251163 isoform 1 [Vitis
           vinifera]
          Length = 434

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 7/93 (7%)
 Frame = +3

Query: 285 PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTL 443
           PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTL
Sbjct: 49  PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 444 LSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVE 542
           LSERG  +D ++KL+ I+ L  SHLGVRVA++E
Sbjct: 109 LSERGAFDDAIDKLQIIQGLAESHLGVRVASME 141


>ref|XP_004137933.1| PREDICTED: uncharacterized protein LOC101204931 [Cucumis sativus]
           gi|449483653|ref|XP_004156650.1| PREDICTED:
           uncharacterized protein LOC101224842 [Cucumis sativus]
          Length = 438

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 5/91 (5%)
 Frame = +3

Query: 285 PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-----NTKGVVLLAMSTLLS 449
           PV +QMI YG++ AR  ++ +SYAQGLLVLEQCLS+   E     N++G VLLAMSTLL+
Sbjct: 58  PVTRQMINYGLSHARSQRSGESYAQGLLVLEQCLSAQSSEGEDADNSRGAVLLAMSTLLA 117

Query: 450 ERGDLNDGMEKLKEIRMLGSSHLGVRVAAVE 542
           ERGD++D ++KL+ I  L    L +RVAA+E
Sbjct: 118 ERGDIHDAIDKLQRIEDLAHCSLDIRVAALE 148


>ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|222842753|gb|EEE80300.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 7/94 (7%)
 Frame = +3

Query: 282 DPVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDEN-------TKGVVLLAMST 440
           +PVA QMI+Y ++LA+  K+ +S  Q +LVLEQCLSS   EN       +KG+VLLAMS+
Sbjct: 49  NPVALQMIDYALSLAKSQKSDESQGQAMLVLEQCLSSQSSENQDVVTHNSKGMVLLAMSS 108

Query: 441 LLSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVE 542
           LLS RG  ND MEKL+ I+ L +SHL VRVAA+E
Sbjct: 109 LLSARGSYNDAMEKLQNIQDLINSHLDVRVAAME 142


>emb|CBI30520.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 7/88 (7%)
 Frame = +3

Query: 300 MIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTLLSERG 458
           MI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTLLSERG
Sbjct: 1   MIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTLLSERG 60

Query: 459 DLNDGMEKLKEIRMLGSSHLGVRVAAVE 542
             +D ++KL+ I+ L  SHLGVRVA++E
Sbjct: 61  AFDDAIDKLQIIQGLAESHLGVRVASME 88


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