BLASTX nr result

ID: Coptis25_contig00011884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011884
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276541.1| PREDICTED: uncharacterized protein LOC100249...    92   7e-28
ref|XP_003521365.1| PREDICTED: uncharacterized protein LOC100816...    82   2e-23
emb|CBI32640.3| unnamed protein product [Vitis vinifera]               92   5e-23
ref|XP_003554347.1| PREDICTED: uncharacterized protein LOC100791...    82   2e-22
ref|XP_004142100.1| PREDICTED: uncharacterized protein LOC101221...    77   2e-21

>ref|XP_002276541.1| PREDICTED: uncharacterized protein LOC100249849 [Vitis vinifera]
          Length = 218

 Score = 92.4 bits (228), Expect(2) = 7e-28
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -2

Query: 339 RFGTGSTSHGSDXXXXXXXXXXXXXXXRFGLPSKSTD-DEEAKKKARSARFAPVTKTDPA 163
           RFGTG T HGSD               RFGLP  S   DEE+KKKAR ARFA V+KTD  
Sbjct: 115 RFGTGPTVHGSDGSKKSEELKRKARAERFGLPLDSAPTDEESKKKARLARFASVSKTDTL 174

Query: 162 EEEKKKARALRFSKTASGALS-LNGNGTS-EQKTTVVAEASGGA 37
           EE+KKKARA+RFS   S +LS +NG G   E KT +  +ASGGA
Sbjct: 175 EEDKKKARAIRFSNPPSDSLSQVNGKGEDIEPKTAIAGKASGGA 218



 Score = 57.8 bits (138), Expect(2) = 7e-28
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 524 ELEKKKLRAERFGMPMKLSEVEKRNSRAERFGTGST 417
           +++KK  RAERFGMP++LSE EKRNSRAERFGTG T
Sbjct: 86  DIQKKIRRAERFGMPVQLSEEEKRNSRAERFGTGPT 121


>ref|XP_003521365.1| PREDICTED: uncharacterized protein LOC100816435 [Glycine max]
          Length = 189

 Score = 81.6 bits (200), Expect(2) = 2e-23
 Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -2

Query: 339 RFGTGSTSHGSDXXXXXXXXXXXXXXXRFGLPSKST-DDEEAKKKARSARFAPVTKTDPA 163
           RFGTGS S GS+                FG+PS +T  DEEAKKKAR ARFAP +K DP 
Sbjct: 89  RFGTGSASQGSEPSKSEELKRKARAER-FGMPSPTTTSDEEAKKKARLARFAPASKVDPQ 147

Query: 162 EEEKKKARALRFSKTASGALSLNGNGTSEQKTTVVAEASGG 40
           EE+K+KARALRF+  +S +++ N NG  + +   +A  +GG
Sbjct: 148 EEDKRKARALRFANPSSTSIA-NVNGEGKIEPAAIAGNAGG 187



 Score = 53.9 bits (128), Expect(2) = 2e-23
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -3

Query: 524 ELEKKKLRAERFGMPMKLSEVEKRNSRAERFGTGS 420
           +++KK  RAERFG+ ++LSE EKRNSRAERFGTGS
Sbjct: 60  DIQKKMRRAERFGISVQLSEKEKRNSRAERFGTGS 94


>emb|CBI32640.3| unnamed protein product [Vitis vinifera]
          Length = 120

 Score = 92.4 bits (228), Expect(2) = 5e-23
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
 Frame = -2

Query: 339 RFGTGSTSHGSDXXXXXXXXXXXXXXXRFGLPSKSTD-DEEAKKKARSARFAPVTKTDPA 163
           RFGTG T HGSD               RFGLP  S   DEE+KKKAR ARFA V+KTD  
Sbjct: 17  RFGTGPTVHGSDGSKKSEELKRKARAERFGLPLDSAPTDEESKKKARLARFASVSKTDTL 76

Query: 162 EEEKKKARALRFSKTASGALS-LNGNGTS-EQKTTVVAEASGGA 37
           EE+KKKARA+RFS   S +LS +NG G   E KT +  +ASGGA
Sbjct: 77  EEDKKKARAIRFSNPPSDSLSQVNGKGEDIEPKTAIAGKASGGA 120



 Score = 41.6 bits (96), Expect(2) = 5e-23
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 485 MPMKLSEVEKRNSRAERFGTGST 417
           MP++LSE EKRNSRAERFGTG T
Sbjct: 1   MPVQLSEEEKRNSRAERFGTGPT 23


>ref|XP_003554347.1| PREDICTED: uncharacterized protein LOC100791970 [Glycine max]
          Length = 198

 Score = 81.6 bits (200), Expect(2) = 2e-22
 Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
 Frame = -2

Query: 339 RFGTGSTSHGSDXXXXXXXXXXXXXXXRFGLPSKSTD-DEEAKKKARSARFAPVTKTDPA 163
           RFGT S S GS+                FG+PS +T  DEEAKKKAR ARFAP +K DP 
Sbjct: 97  RFGTVSASQGSEPSKSEDLKRKARAER-FGMPSPTTTADEEAKKKARLARFAPASKVDPQ 155

Query: 162 EEEKKKARALRFSKTASGAL-SLNGNGTSEQKTTVVAEASGG 40
           EE+K+KARALRF+  +S ++ ++NG    E K  +   A GG
Sbjct: 156 EEDKRKARALRFANPSSTSIANVNGEAKIEPKAAIAGNAGGG 197



 Score = 50.4 bits (119), Expect(2) = 2e-22
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -3

Query: 524 ELEKKKLRAERFGMPMKLSEVEKRNSRAERFGTGS 420
           +++KK  RAERFG+ ++LSE EKRNSRAERFGT S
Sbjct: 68  DIQKKMRRAERFGISVQLSEKEKRNSRAERFGTVS 102


>ref|XP_004142100.1| PREDICTED: uncharacterized protein LOC101221301 [Cucumis sativus]
          Length = 204

 Score = 77.4 bits (189), Expect(2) = 2e-21
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = -2

Query: 339 RFGTGSTSHGSDXXXXXXXXXXXXXXXRFGLPSKSTDDEEAKKKARSARFAPVTKTDPAE 160
           RFG G+T++G                 RFGL +  T D+EAKKKAR ARF+  +K DP E
Sbjct: 103 RFGMGTTTNGLGASNKTEEVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQE 162

Query: 159 EEKKKARALRFSKTASGALS-LNGNGTSEQKTTVVAEASGGA 37
           EEK+KARA+RFS     +L+ ++G G  E    V  ++ GGA
Sbjct: 163 EEKRKARAIRFSNPTPNSLTQVDGKGNVETIADVAGKSGGGA 204



 Score = 50.8 bits (120), Expect(2) = 2e-21
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -3

Query: 524 ELEKKKLRAERFGMPMKLSEVEKRNSRAERFGTGST 417
           ++++K  RAERFG+ ++LSE EKRNSRAERFG G+T
Sbjct: 74  DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTT 109


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