BLASTX nr result

ID: Coptis25_contig00011881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011881
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vini...   228   3e-58
ref|XP_002312967.1| amino acid permease [Populus trichocarpa] gi...   226   2e-57
ref|XP_003540867.1| PREDICTED: amino acid permease 2-like [Glyci...   223   1e-56
ref|XP_003538987.1| PREDICTED: LOW QUALITY PROTEIN: amino acid p...   220   8e-56
ref|XP_002534252.1| amino acid transporter, putative [Ricinus co...   219   2e-55

>ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vinifera]
           gi|297744622|emb|CBI37884.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score =  228 bits (582), Expect = 3e-58
 Identities = 109/124 (87%), Positives = 115/124 (92%)
 Frame = -2

Query: 372 GTRNYTYMDAVKANLGGRKVAICGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCLHESGG 193
           G RNYTYM+AVKANLGG+KV  CG IQYLNLFG AIGYTIAASVSMMAIKRSNC H+SGG
Sbjct: 125 GQRNYTYMEAVKANLGGKKVLACGWIQYLNLFGTAIGYTIAASVSMMAIKRSNCFHKSGG 184

Query: 192 KDPCHMSSNGYMITFGITEIVFSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAEN 13
           KDPCHMSSNGYMITFGI EI+FSQIPDFDQVWWLSIVAA+MSFTYS+VGL LGV KVAEN
Sbjct: 185 KDPCHMSSNGYMITFGIIEIIFSQIPDFDQVWWLSIVAAIMSFTYSSVGLGLGVAKVAEN 244

Query: 12  GSFK 1
           GSFK
Sbjct: 245 GSFK 248


>ref|XP_002312967.1| amino acid permease [Populus trichocarpa]
           gi|222849375|gb|EEE86922.1| amino acid permease [Populus
           trichocarpa]
          Length = 469

 Score =  226 bits (575), Expect = 2e-57
 Identities = 108/124 (87%), Positives = 115/124 (92%)
 Frame = -2

Query: 372 GTRNYTYMDAVKANLGGRKVAICGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCLHESGG 193
           G RNYTYMDAVK+ LGGRKV +CGLIQYLNLFGVAIGYTIAASVSMMAIKRSNC H SGG
Sbjct: 82  GQRNYTYMDAVKSYLGGRKVMLCGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCFHSSGG 141

Query: 192 KDPCHMSSNGYMITFGITEIVFSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAEN 13
           KDPCHMSSNG+MITFGI EI+FSQIPDFDQVWWLSIVAA+MSFTYSTVGL LG+ KVA N
Sbjct: 142 KDPCHMSSNGFMITFGIIEILFSQIPDFDQVWWLSIVAAIMSFTYSTVGLGLGIGKVAGN 201

Query: 12  GSFK 1
           G+FK
Sbjct: 202 GTFK 205


>ref|XP_003540867.1| PREDICTED: amino acid permease 2-like [Glycine max]
          Length = 513

 Score =  223 bits (569), Expect = 1e-56
 Identities = 106/125 (84%), Positives = 116/125 (92%)
 Frame = -2

Query: 375 NGTRNYTYMDAVKANLGGRKVAICGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCLHESG 196
           NG RNYTYM+AVK+ LGG+KV +CGLIQY+NLFGVAIGYTIAASVSMMAIKRSNC H S 
Sbjct: 125 NGHRNYTYMEAVKSILGGKKVKLCGLIQYINLFGVAIGYTIAASVSMMAIKRSNCYHSSH 184

Query: 195 GKDPCHMSSNGYMITFGITEIVFSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAE 16
           GKDPCHMSSNGYMITFGI E++FSQIPDFDQVWWLSIVAA+MSFTYS+VGLSLGV KVAE
Sbjct: 185 GKDPCHMSSNGYMITFGIAEVIFSQIPDFDQVWWLSIVAAIMSFTYSSVGLSLGVAKVAE 244

Query: 15  NGSFK 1
           N +FK
Sbjct: 245 NKTFK 249


>ref|XP_003538987.1| PREDICTED: LOW QUALITY PROTEIN: amino acid permease 2-like [Glycine
           max]
          Length = 628

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/124 (84%), Positives = 114/124 (91%)
 Frame = -2

Query: 372 GTRNYTYMDAVKANLGGRKVAICGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCLHESGG 193
           G RNYTYM+AV + LGG+KV +CGLIQY+NLFGVAIGYTIAASVSMMAIKRSNC H S G
Sbjct: 241 GHRNYTYMEAVNSILGGKKVKLCGLIQYINLFGVAIGYTIAASVSMMAIKRSNCYHSSHG 300

Query: 192 KDPCHMSSNGYMITFGITEIVFSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAEN 13
           KDPCHMSSNGYMITFGI E++FSQIPDFDQVWWLSIVAA+MSFTYS+VGLSLGV KVAEN
Sbjct: 301 KDPCHMSSNGYMITFGIAEVIFSQIPDFDQVWWLSIVAAIMSFTYSSVGLSLGVAKVAEN 360

Query: 12  GSFK 1
            SFK
Sbjct: 361 KSFK 364


>ref|XP_002534252.1| amino acid transporter, putative [Ricinus communis]
           gi|223525639|gb|EEF28130.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 484

 Score =  219 bits (558), Expect = 2e-55
 Identities = 105/124 (84%), Positives = 111/124 (89%)
 Frame = -2

Query: 372 GTRNYTYMDAVKANLGGRKVAICGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCLHESGG 193
           G  NYTYM+AVKANLGGRKV  CGLIQYLNLFGV IGYTIAASVSMMAIKRSNC H SGG
Sbjct: 97  GQINYTYMEAVKANLGGRKVFFCGLIQYLNLFGVVIGYTIAASVSMMAIKRSNCFHASGG 156

Query: 192 KDPCHMSSNGYMITFGITEIVFSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAEN 13
           KDPCHMSSNGYMITFGI E++FSQIPDFDQ+WWLSIVAA+MSFTYSTVGL LGV KVA N
Sbjct: 157 KDPCHMSSNGYMITFGIAEVIFSQIPDFDQIWWLSIVAAIMSFTYSTVGLGLGVGKVAGN 216

Query: 12  GSFK 1
            + K
Sbjct: 217 AAAK 220


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