BLASTX nr result
ID: Coptis25_contig00011860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011860
(1814 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ri... 692 0.0
ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260... 684 0.0
ref|XP_003544778.1| PREDICTED: uncharacterized protein LOC100776... 665 0.0
ref|XP_002302270.1| predicted protein [Populus trichocarpa] gi|2... 664 0.0
ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776... 663 0.0
>ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223526176|gb|EEF28506.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 478
Score = 692 bits (1787), Expect = 0.0
Identities = 345/474 (72%), Positives = 394/474 (83%), Gaps = 3/474 (0%)
Frame = -1
Query: 1757 SAKCSLCEKSNLASICAVCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKADDQLS 1578
S+ C++CE SN ASIC VCV+ RL EY LKSL++ RD YSRL+ LVAK KADDQL+
Sbjct: 5 SSCCAICENSNRASICTVCVNYRLNEYSTLLKSLKSRRDLLYSRLSEVLVAKGKADDQLN 64
Query: 1577 WRVHQNQKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRVEQLE 1398
WRVHQN+KL+ LREKL +++QL Q KAK +KMS DL +YGLLES+ L+KNRV+QLE
Sbjct: 65 WRVHQNEKLANLREKLLRSKEQLIQAKAKTEKMSSDLNAKYGLLESSRSALEKNRVDQLE 124
Query: 1397 KFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYDQICN 1218
K++PNLICTQSLGHMAITSE LH SV +KQICKLFPQRRV+V+G++KDGS+GQYDQICN
Sbjct: 125 KYFPNLICTQSLGHMAITSELLHNLSVTVKQICKLFPQRRVIVEGEKKDGSSGQYDQICN 184
Query: 1217 ARLPRGLDPHSVPSEELAASLGYMVQLLNLVVRALAAPVLHNSGFAGSCSRIWQRDSYWD 1038
ARLPRGLDPHS+PSEELAASLGYMVQLLNLVV LAAP LHNSGFAGSCSRIWQRDSYW+
Sbjct: 185 ARLPRGLDPHSIPSEELAASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWN 244
Query: 1037 ARPSSRSNEFPLFIPRQNSCTRGGENSWSDRSSSSFGVASMESEKKPTLDS--TGSFNCN 864
ARPSSRSNE+PLFIPRQ C+ GENSW+DRSSS+FGVASMESE++ LDS + SFN N
Sbjct: 245 ARPSSRSNEYPLFIPRQRYCSTSGENSWTDRSSSNFGVASMESERRARLDSSRSSSFNYN 304
Query: 863 SASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTLSSSK 684
SASPHSVETHKDLQKGISL+KKSVAC+TAY YN LCLD P+EASTFEAFAKLL TLSSSK
Sbjct: 305 SASPHSVETHKDLQKGISLMKKSVACVTAYGYNLLCLDVPAEASTFEAFAKLLATLSSSK 364
Query: 683 EVRSVFSLKIASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLSNSA 507
EVRSVFSLK+A SRSCKQ QKLNK +N DNNL NSA
Sbjct: 365 EVRSVFSLKMACSRSCKQVQKLNKSVWNVNSIISSSTLMESAHAPHLTKNINDNNLRNSA 424
Query: 506 VSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 345
SFL+ NE+SD GK+ESL++GWDLVEHPTFPPPPSQ+ED+EHWTRAMF+DATK+
Sbjct: 425 TSFLFANEISDAGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMFIDATKK 478
>ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260778 [Vitis vinifera]
gi|302141899|emb|CBI19102.3| unnamed protein product
[Vitis vinifera]
Length = 478
Score = 684 bits (1764), Expect = 0.0
Identities = 346/474 (72%), Positives = 392/474 (82%), Gaps = 3/474 (0%)
Frame = -1
Query: 1757 SAKCSLCEKSNLASICAVCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKADDQLS 1578
++ CS+CEKSNLASICAVCV+ RL EY SLKS + RDS Y RL+ LVAK KADDQ++
Sbjct: 5 TSSCSICEKSNLASICAVCVNYRLNEYNTSLKSSKGRRDSLYLRLSEVLVAKGKADDQIN 64
Query: 1577 WRVHQNQKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRVEQLE 1398
WRV QN+KL++LREKL ++Q GKAK++KMS DLK +YGLLESAM L+KNRVEQLE
Sbjct: 65 WRVLQNEKLARLREKLRHRKEQYLDGKAKVEKMSNDLKLKYGLLESAMSMLEKNRVEQLE 124
Query: 1397 KFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYDQICN 1218
KFYPNLICTQ+LG MAITSER HKQSVVIKQICKLFPQRRV +DG++KDGS+ YDQICN
Sbjct: 125 KFYPNLICTQNLGLMAITSERFHKQSVVIKQICKLFPQRRVNIDGEKKDGSSRPYDQICN 184
Query: 1217 ARLPRGLDPHSVPSEELAASLGYMVQLLNLVVRALAAPVLHNSGFAGSCSRIWQRDSYWD 1038
RLPR LDPHSVPS+ELAASLGYMVQLLNLVV LAAP LHNSGFAGSCSRIWQR+SYW+
Sbjct: 185 VRLPRVLDPHSVPSDELAASLGYMVQLLNLVVYNLAAPALHNSGFAGSCSRIWQRESYWN 244
Query: 1037 ARPSSRSNEFPLFIPRQNSCTRGGENSWSDRSSSSFGVASMESEKKPTLDSTG--SFNCN 864
RPSSRSNE+PLFIPRQN C+ GENSWS+RSSS+FG+ASMES++KP L+S+G SFN +
Sbjct: 245 PRPSSRSNEYPLFIPRQNLCSTNGENSWSERSSSNFGIASMESDRKPRLESSGSSSFNYS 304
Query: 863 SASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTLSSSK 684
SAS HSVETHKDLQKGISLLKKSVAC+T YCY+SLCLD P+EASTFEAFAKLL LSSSK
Sbjct: 305 SASLHSVETHKDLQKGISLLKKSVACLTTYCYSSLCLDVPTEASTFEAFAKLLAILSSSK 364
Query: 683 EVRSVFSLKIASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLSNSA 507
EVRSVFSLK+A SRSCKQ Q+LNK RN DNNL NSA
Sbjct: 365 EVRSVFSLKMACSRSCKQVQQLNKSIWNMNSAISSSTLLESAHTLPMTRNIFDNNLPNSA 424
Query: 506 VSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 345
SFLYT EMSD+GK+ESL+E WDLVEH FPPPPSQ+EDIEHWTRAM +DATK+
Sbjct: 425 ASFLYTTEMSDIGKNESLIEEWDLVEHANFPPPPSQTEDIEHWTRAMIIDATKK 478
>ref|XP_003544778.1| PREDICTED: uncharacterized protein LOC100776426 isoform 2 [Glycine
max]
Length = 477
Score = 665 bits (1716), Expect = 0.0
Identities = 330/471 (70%), Positives = 391/471 (83%), Gaps = 3/471 (0%)
Frame = -1
Query: 1757 SAKCSLCEKSNLASICAVCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKADDQLS 1578
++ C++CE SN ASIC++CV+ RL EY SLK L++ RDS Y +L+ LV K K DDQ +
Sbjct: 5 TSNCAICENSNQASICSICVNYRLNEYNTSLKLLKDRRDSLYLKLSEVLVRKGKGDDQAN 64
Query: 1577 WRVHQNQKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRVEQLE 1398
WRV Q++KL++L+EKL +++Q++QG+AK++ MS DLK +YGLLESA+ TL+KNRVEQLE
Sbjct: 65 WRVLQHEKLARLKEKLRQSKEQVTQGRAKIETMSADLKLKYGLLESALSTLEKNRVEQLE 124
Query: 1397 KFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYDQICN 1218
KFYPNLICTQSLGH+AITSE LHK+SVVIKQICKLFPQRRVV++G+R+DG +GQYDQICN
Sbjct: 125 KFYPNLICTQSLGHVAITSELLHKESVVIKQICKLFPQRRVVIEGERRDGCSGQYDQICN 184
Query: 1217 ARLPRGLDPHSVPSEELAASLGYMVQLLNLVVRALAAPVLHNSGFAGSCSRIWQRDSYWD 1038
ARLPR LDPHSVPSEEL+ SLGYMVQLLNLV+ LAAP LHNSGFAGSCSRIWQRDSYWD
Sbjct: 185 ARLPRALDPHSVPSEELSTSLGYMVQLLNLVIHNLAAPALHNSGFAGSCSRIWQRDSYWD 244
Query: 1037 ARPSSRSNEFPLFIPRQNSCTRGGENSWSDRSSSSFGVASMESEKKPTLDSTG--SFNCN 864
ARPSSRSNE+PLFIPRQN C+ GENSWS+RSSS+FGVAS+ESE++ LDS+G SFN +
Sbjct: 245 ARPSSRSNEYPLFIPRQNYCSTDGENSWSERSSSNFGVASVESERRHRLDSSGSTSFNYS 304
Query: 863 SASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTLSSSK 684
AS HSV+THKDLQKGISLLKKSV CITAYCYNSLCLD PSEASTFEAFAKLL TL+SSK
Sbjct: 305 LASSHSVQTHKDLQKGISLLKKSVVCITAYCYNSLCLDVPSEASTFEAFAKLLATLASSK 364
Query: 683 EVRSVFSLKIASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLSNSA 507
EVRSVFSLK+A SR+CKQ Q+LNK +N +N L +S
Sbjct: 365 EVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSVPTTKNLIENYLPSST 424
Query: 506 VSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDA 354
SFLY ++SD GK+E L+EGWD+VEHPTFPPPPSQSED+EHWTRAMF+DA
Sbjct: 425 GSFLYAADLSD-GKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDA 474
>ref|XP_002302270.1| predicted protein [Populus trichocarpa] gi|222843996|gb|EEE81543.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 664 bits (1713), Expect = 0.0
Identities = 337/474 (71%), Positives = 386/474 (81%), Gaps = 3/474 (0%)
Frame = -1
Query: 1757 SAKCSLCEKSNLASICAVCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKADDQLS 1578
S+ C++CE SN ASIC +CV+ RL EY LKSL + RDS YS+L+ L+AK KADDQ +
Sbjct: 5 SSCCAICENSNRASICPICVNYRLNEYGTLLKSLNSRRDSLYSKLSVVLIAKGKADDQFN 64
Query: 1577 WRVHQNQKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRVEQLE 1398
WRV QN+KL+ REKL+ ++QL+QGKAK++K+S DLK + G+LESA L+KNR+EQLE
Sbjct: 65 WRVQQNEKLASSREKLHRNKEQLAQGKAKVEKLSQDLKKKNGMLESARNVLEKNRMEQLE 124
Query: 1397 KFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYDQICN 1218
KFYPNLICTQSLGHMAITSE LHKQSVVIKQICKLFPQRRV VDG+R +GQYDQICN
Sbjct: 125 KFYPNLICTQSLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGER--NFSGQYDQICN 182
Query: 1217 ARLPRGLDPHSVPSEELAASLGYMVQLLNLVVRALAAPVLHNSGFAGSCSRIWQRDSYWD 1038
ARLPRGLDPHSV SEELAASLGYMVQLLNLV LAAP LHN+GFAGSCSRIWQRDSYW+
Sbjct: 183 ARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRDSYWN 242
Query: 1037 ARPSSRSNEFPLFIPRQNSCTRGGENSWSDRSSSSFGVASMESEKKPTLDST--GSFNCN 864
A PSSRSNE+PLFIPRQN C+ ENSW+D+SSS+FGVASMESE++P LDST SFN +
Sbjct: 243 ACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNSFNYS 302
Query: 863 SASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTLSSSK 684
S SPHSVETHKDLQKG+SLLKKSVAC+TAYCYN LCLD PS+ STFEAFAKLL TLSSSK
Sbjct: 303 SVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLLSTLSSSK 362
Query: 683 EVRSVFSLKIASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLSNSA 507
EVRSVF+LK+A SRSCKQ QKLNK ++N DNNL NSA
Sbjct: 363 EVRSVFNLKMACSRSCKQVQKLNKSVWNVNSAISSSALLESAHALQLMKNTSDNNLPNSA 422
Query: 506 VSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 345
SFL+ +SD GK+ES ++GWDLVEHPTFPPPPSQ EDIEHWTRAMF+DATK+
Sbjct: 423 ASFLFATGISD-GKNESFIDGWDLVEHPTFPPPPSQVEDIEHWTRAMFIDATKK 475
>ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776426 isoform 1 [Glycine
max]
Length = 475
Score = 663 bits (1711), Expect = 0.0
Identities = 329/470 (70%), Positives = 389/470 (82%), Gaps = 2/470 (0%)
Frame = -1
Query: 1757 SAKCSLCEKSNLASICAVCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKADDQLS 1578
++ C++CE SN ASIC++CV+ RL EY SLK L++ RDS Y +L+ LV K K DDQ +
Sbjct: 5 TSNCAICENSNQASICSICVNYRLNEYNTSLKLLKDRRDSLYLKLSEVLVRKGKGDDQAN 64
Query: 1577 WRVHQNQKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRVEQLE 1398
WRV Q++KL++L+EKL +++Q++QG+AK++ MS DLK +YGLLESA+ TL+KNRVEQLE
Sbjct: 65 WRVLQHEKLARLKEKLRQSKEQVTQGRAKIETMSADLKLKYGLLESALSTLEKNRVEQLE 124
Query: 1397 KFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYDQICN 1218
KFYPNLICTQSLGH+AITSE LHK+SVVIKQICKLFPQRRVV++G+R+DG +GQYDQICN
Sbjct: 125 KFYPNLICTQSLGHVAITSELLHKESVVIKQICKLFPQRRVVIEGERRDGCSGQYDQICN 184
Query: 1217 ARLPRGLDPHSVPSEELAASLGYMVQLLNLVVRALAAPVLHNSGFAGSCSRIWQRDSYWD 1038
ARLPR LDPHSVPSEEL+ SLGYMVQLLNLV+ LAAP LHNSGFAGSCSRIWQRDSYWD
Sbjct: 185 ARLPRALDPHSVPSEELSTSLGYMVQLLNLVIHNLAAPALHNSGFAGSCSRIWQRDSYWD 244
Query: 1037 ARPSSRSNEFPLFIPRQNSCTRGGENSWSDRSSSSFGVASMESEKKPTLDSTG--SFNCN 864
ARPSSRSNE+PLFIPRQN C+ GENSWS+RSSS+FGVAS+ESE++ LDS+G SFN +
Sbjct: 245 ARPSSRSNEYPLFIPRQNYCSTDGENSWSERSSSNFGVASVESERRHRLDSSGSTSFNYS 304
Query: 863 SASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTLSSSK 684
AS HSV+THKDLQKGISLLKKSV CITAYCYNSLCLD PSEASTFEAFAKLL TL+SSK
Sbjct: 305 LASSHSVQTHKDLQKGISLLKKSVVCITAYCYNSLCLDVPSEASTFEAFAKLLATLASSK 364
Query: 683 EVRSVFSLKIASSRSCKQAQKLNKXXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLSNSAV 504
EVRSVFSLK+A SR+CKQ Q+LNK +N L +S
Sbjct: 365 EVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSVPTTRI-ENYLPSSTG 423
Query: 503 SFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDA 354
SFLY ++SD GK+E L+EGWD+VEHPTFPPPPSQSED+EHWTRAMF+DA
Sbjct: 424 SFLYAADLSD-GKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDA 472