BLASTX nr result

ID: Coptis25_contig00011857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011857
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]   444   e-122
ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   440   e-121
tpg|DAA42306.1| TPA: patatin T5 [Zea mays]                            433   e-119
ref|XP_002449852.1| hypothetical protein SORBIDRAFT_05g024390 [S...   433   e-119
ref|XP_002451118.1| hypothetical protein SORBIDRAFT_05g024380 [S...   433   e-119

>gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]
          Length = 411

 Score =  444 bits (1142), Expect = e-122
 Identities = 221/391 (56%), Positives = 290/391 (74%), Gaps = 14/391 (3%)
 Frame = -3

Query: 1227 PPSA-----GKMVTVLSXXXXXXXXXXXGTMLAFLESKLQVLDGPDVRLVDYFDIVAGTS 1063
            PP A     GKMVTVLS           GT+LAFLESKLQ LDGP+ RL DYFD+VAGTS
Sbjct: 21   PPMAFAVTKGKMVTVLSVDGGGIRGIIPGTVLAFLESKLQELDGPNARLADYFDVVAGTS 80

Query: 1062 TGGLVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEISTT---------GPKYDG 910
            TGGL+ TMLTAPN DNRPLY AKDI++FY+E  P IFPQ+  ++          GPKYDG
Sbjct: 81   TGGLITTMLTAPNKDNRPLYQAKDISNFYMEHGPQIFPQSRRNSFVRRVTNLFGGPKYDG 140

Query: 909  KYLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGT 730
            KYL++++ ++LGN ++ Q LTN IIP FD+  +QP IF+  +A  ++S+N +LSDICL T
Sbjct: 141  KYLRSIINSILGNLTMKQTLTNTIIPTFDIKRLQPIIFSTADAKANISKNAQLSDICLST 200

Query: 729  SAAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMGQNPDFSHIKP 550
            SAAPTY P HYFETKD+ G  +TF+LVDGG+AA+NPTL+AM+ ++++IM  N  +  ++ 
Sbjct: 201  SAAPTYFPVHYFETKDAEGKTRTFDLVDGGLAANNPTLMAMTHISKQIMTGNFQYEDMEK 260

Query: 549  MDCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHT 370
            MDC ++L++SLGTG+ K E +Y+A + S W    W+++NG TPLID Y++ASADMVDIH 
Sbjct: 261  MDCKKVLVLSLGTGTGKHEEKYNATIASRWGMLGWIYNNGATPLIDVYADASADMVDIHV 320

Query: 369  SVLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGK 190
            S +FQ+  ++ NY+RIQ D LTG+AA++D+AT EN+  LV+IG DLLK PVSR+NL TG+
Sbjct: 321  STMFQTLASEKNYIRIQDDNLTGEAASMDIATIENMGRLVQIGNDLLKKPVSRVNLETGR 380

Query: 189  YEACRGEGTNEEALAHFANLLSDERKLRRSN 97
            YE    EGTNE A+  FA LLS+ERKLR +N
Sbjct: 381  YEPVVAEGTNEAAIIRFAQLLSEERKLRLNN 411


>ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Vitis
            vinifera]
          Length = 388

 Score =  440 bits (1132), Expect = e-121
 Identities = 220/380 (57%), Positives = 281/380 (73%), Gaps = 8/380 (2%)
 Frame = -3

Query: 1215 GKMVTVLSXXXXXXXXXXXGTMLAFLESKLQVLDGPDVRLVDYFDIVAGTSTGGLVATML 1036
            G+MVTVLS           GT+LAFLESKLQ LDG + R+ DYFDI+AGTSTGGLV +ML
Sbjct: 8    GRMVTVLSIDGGGIRGIIPGTLLAFLESKLQELDGANARIADYFDIIAGTSTGGLVTSML 67

Query: 1035 TAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEIS-------TTGPKYDGKYLKTLLQNML 877
            TAPN DNRP+YAAKDIN+FY+E  P IFPQN  +        TGPKYDGKYL++L   +L
Sbjct: 68   TAPNKDNRPIYAAKDINNFYLEHCPKIFPQNSTNPNTSVSGATGPKYDGKYLRSLTDELL 127

Query: 876  GNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTSAAPTYLPGHY 697
            G+ ++ Q LTNV+IP FD+  +QP IF+  +A  +V++N +LSDIC+GTSAAPTYLP HY
Sbjct: 128  GDLTLKQTLTNVVIPTFDIKLLQPIIFSTKDARTNVAKNARLSDICIGTSAAPTYLPAHY 187

Query: 696  FETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEI-MGQNPDFSHIKPMDCTRILIIS 520
            FET+D++G  ++F+L+DGG AA+NPTL+ +S VT+EI +  N     I PMD  R+L++S
Sbjct: 188  FETRDASGKTRSFDLIDGGXAANNPTLMGISQVTKEIILMHNSQSEEINPMDPKRMLVLS 247

Query: 519  LGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTSVLFQSNNAK 340
            LGTG+ K E +Y+    S W   +WL  NG TPL+D Y +AS+DMVDIH S LFQS   +
Sbjct: 248  LGTGAPKLEEKYNGATASSWGPLEWLLDNGATPLLDIYGHASSDMVDIHVSTLFQSRRCQ 307

Query: 339  ANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKYEACRGEGTN 160
             NYLRIQ DTLTGDA+++D+AT ENL+ L +IGK+LL+ PVSR+NL TGKYE   GEGTN
Sbjct: 308  KNYLRIQDDTLTGDASSVDIATVENLERLEEIGKELLEKPVSRVNLETGKYEELVGEGTN 367

Query: 159  EEALAHFANLLSDERKLRRS 100
              AL  FA LLS +RKLR++
Sbjct: 368  RGALTQFAMLLSHQRKLRQA 387


>tpg|DAA42306.1| TPA: patatin T5 [Zea mays]
          Length = 407

 Score =  433 bits (1114), Expect = e-119
 Identities = 209/405 (51%), Positives = 291/405 (71%), Gaps = 11/405 (2%)
 Frame = -3

Query: 1266 SNARINATRNANPPPSAGKMVTVLSXXXXXXXXXXXGTMLAFLESKLQVLDGPDVRLVDY 1087
            SNA  N      PPPS GK++T+LS            T++A LE+KLQ LDGPD R+ DY
Sbjct: 3    SNASSNCATVPQPPPSTGKLITILSIDGGGIRGLIPATIIAHLEAKLQELDGPDARIADY 62

Query: 1086 FDIVAGTSTGGLVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEIS--------- 934
            FD++AGTSTG L+ +ML AP+ +NRPL+AAKD+N FY+E  P IFPQ +           
Sbjct: 63   FDVIAGTSTGALLTSMLAAPDQNNRPLFAAKDLNTFYLENGPKIFPQKKAGFLTPVANLL 122

Query: 933  --TTGPKYDGKYLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRN 760
                GPKYDG +L   ++++  +  +   +TNVI+PAFDV Y+QP IF+  EA  D  +N
Sbjct: 123  GLVRGPKYDGVFLHDKIKSLTHDVRVADTVTNVIVPAFDVKYLQPIIFSTYEAKNDTLKN 182

Query: 759  TKLSDICLGTSAAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMG 580
              LSDIC+ TSAAPTY P H+F+T+ ++G  + F+LVDGGVAA+NPT++AMS++T+E++ 
Sbjct: 183  AHLSDICISTSAAPTYFPAHFFKTEATDGRSREFHLVDGGVAANNPTMVAMSMLTKEVLR 242

Query: 579  QNPDFSHIKPMDCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSN 400
            +NPDF+  +P + T  LIIS+GTGSAK   +Y+A   ++W    WL++ G TP+ID +S+
Sbjct: 243  RNPDFNAGRPTEYTNYLIISVGTGSAKQAEKYTAPQCAKWGLFQWLYNGGFTPIIDIFSH 302

Query: 399  ASADMVDIHTSVLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAP 220
            AS+DMVDIH +VLFQ+ + + NYLRIQ DTL G+ +++D+ATKEN+++L+ IG+DLLK P
Sbjct: 303  ASSDMVDIHAAVLFQALHCEKNYLRIQDDTLIGNTSSVDIATKENMESLIGIGQDLLKKP 362

Query: 219  VSRINLLTGKYEACRGEGTNEEALAHFANLLSDERKLRRSNVNAH 85
            V+R+N+ TG YE C GEGTN EALAHFA  LSDERKLR+ N++++
Sbjct: 363  VARVNIDTGVYEPCSGEGTNAEALAHFAKKLSDERKLRKRNLDSY 407


>ref|XP_002449852.1| hypothetical protein SORBIDRAFT_05g024390 [Sorghum bicolor]
            gi|241935695|gb|EES08840.1| hypothetical protein
            SORBIDRAFT_05g024390 [Sorghum bicolor]
          Length = 405

 Score =  433 bits (1113), Expect = e-119
 Identities = 206/402 (51%), Positives = 291/402 (72%), Gaps = 11/402 (2%)
 Frame = -3

Query: 1266 SNARINATRNANPPPSAGKMVTVLSXXXXXXXXXXXGTMLAFLESKLQVLDGPDVRLVDY 1087
            +N   N T    PPPS GK++T+LS            T++A LE+KLQ LDGPD R+ DY
Sbjct: 4    NNGTANCTTVPQPPPSTGKLITILSIDGGGIRGLIPATIIAHLEAKLQELDGPDARIADY 63

Query: 1086 FDIVAGTSTGGLVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEIS--------- 934
            FD++AGTSTG L+ +ML AP+++NRPL++AKD+  FY+E  P IFPQ +           
Sbjct: 64   FDVIAGTSTGALLTSMLAAPDDNNRPLFSAKDLTTFYLENGPKIFPQKKAGFLTPVRNLL 123

Query: 933  --TTGPKYDGKYLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRN 760
                GPKYDG +L   ++++  +  +   +TN+I+PAFDV Y+QP IF+  EA  D  +N
Sbjct: 124  GLVRGPKYDGVFLHDKIKSLTHDVKVADTVTNIIVPAFDVKYLQPIIFSTYEAKADTLKN 183

Query: 759  TKLSDICLGTSAAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMG 580
              LSDIC+ TSAAPTY P H+F+T+ ++G  + F+LVDGGVAA+NPT++AMS++T+E++ 
Sbjct: 184  AHLSDICISTSAAPTYFPAHFFKTEATDGRSREFHLVDGGVAANNPTMVAMSMLTKEVLR 243

Query: 579  QNPDFSHIKPMDCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSN 400
            +NPDF+  +P + T  LIIS+GTGSAK   +Y+A   ++W    WL++ G TP+ID +S+
Sbjct: 244  RNPDFNAGRPTEYTNYLIISVGTGSAKQAEKYTAPQCAKWGLIQWLYNGGFTPIIDIFSH 303

Query: 399  ASADMVDIHTSVLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAP 220
            AS+DMVDIH +VLF++ + + NYLRIQ DTLTGD +++D+ATKEN+++L+ IG++LLK P
Sbjct: 304  ASSDMVDIHAAVLFEALHCEKNYLRIQDDTLTGDTSSVDIATKENMESLIGIGQELLKKP 363

Query: 219  VSRINLLTGKYEACRGEGTNEEALAHFANLLSDERKLRRSNV 94
            V+R+N+ TG YE+C GEGTN EALAHFA  LSDERKLR+SN+
Sbjct: 364  VARVNIDTGVYESCSGEGTNAEALAHFAKKLSDERKLRKSNL 405


>ref|XP_002451118.1| hypothetical protein SORBIDRAFT_05g024380 [Sorghum bicolor]
            gi|4539677|gb|AAD22170.1|AF061282_24 patatin-like protein
            [Sorghum bicolor] gi|241936961|gb|EES10106.1|
            hypothetical protein SORBIDRAFT_05g024380 [Sorghum
            bicolor]
          Length = 410

 Score =  433 bits (1113), Expect = e-119
 Identities = 210/406 (51%), Positives = 295/406 (72%), Gaps = 12/406 (2%)
 Frame = -3

Query: 1266 SNARINATRNANPPPSAGKMVTVLSXXXXXXXXXXXGTMLAFLESKLQVLDGPDVRLVDY 1087
            S +  N      PPPS GK++T+LS            T++A+LE+KLQ LDGPD R+ DY
Sbjct: 5    SKSTANCATVPQPPPSKGKLITILSIDGGGIRGLIPATIIAYLEAKLQELDGPDARIADY 64

Query: 1086 FDIVAGTSTGGLVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQ----------NEI 937
            FD++AGTSTG L+ +ML AP+++NRPL+AAKD+  FY+E  P IFPQ          N I
Sbjct: 65   FDVIAGTSTGALLTSMLAAPDDNNRPLFAAKDLTTFYLENGPKIFPQRKAGWLTPVANLI 124

Query: 936  STT-GPKYDGKYLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRN 760
             T  GPKYDG +L   ++++  +  +   +TN+I+PAFDV Y+QP IF+  EA  D  +N
Sbjct: 125  GTMRGPKYDGVFLHDKIKSLTHDVKVADTVTNIIVPAFDVKYLQPIIFSTYEAKTDALKN 184

Query: 759  TKLSDICLGTSAAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMG 580
              LSDIC+ TSAAPTY P H+F+T+ + G  + ++LVDGGVAA+NPT++AMS++T+E+  
Sbjct: 185  AHLSDICISTSAAPTYFPAHFFKTEATGGRSREYHLVDGGVAANNPTMVAMSMLTKEVHR 244

Query: 579  QNPDFSHI-KPMDCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYS 403
            +NPDF+ + +P + T  L+IS+GTGSAK   +Y+A   ++W    WL+  G TP+ID +S
Sbjct: 245  RNPDFNVVGRPTEYTNYLVISVGTGSAKQAEKYTAEQCAKWGLIQWLYHGGFTPIIDIFS 304

Query: 402  NASADMVDIHTSVLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKA 223
            +AS+DMVDIH SVLFQ+ + + NYLRIQ D+LTGDA+++D+ATKEN+++L+ IG++LLK 
Sbjct: 305  HASSDMVDIHASVLFQALHCEKNYLRIQDDSLTGDASSVDIATKENMESLIGIGQELLKK 364

Query: 222  PVSRINLLTGKYEACRGEGTNEEALAHFANLLSDERKLRRSNVNAH 85
            PV+R+N+ TG YE+C GEGTN EALAHFA  LSDERKLR+SN+N++
Sbjct: 365  PVARVNIDTGVYESCSGEGTNAEALAHFAKQLSDERKLRKSNLNSY 410


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