BLASTX nr result
ID: Coptis25_contig00011841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011841
(2174 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD... 533 e-149
emb|CBI17339.3| unnamed protein product [Vitis vinifera] 533 e-149
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2... 505 e-140
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag... 486 e-135
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera] 478 e-132
>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
Length = 1013
Score = 533 bits (1374), Expect = e-149
Identities = 286/503 (56%), Positives = 359/503 (71%), Gaps = 11/503 (2%)
Frame = -3
Query: 2172 VQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLW 1993
V+++ W ++RL T +E++ ++L+ITGQAGVGKSAT+H IASHLGARL EWNTP PT+W
Sbjct: 110 VEEVTVWFEKRLRTSREEMC-NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIW 168
Query: 1992 QEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINXXXX 1813
QEH++N SG+ Y SKLDEFESFVER+RKY L+P G S N
Sbjct: 169 QEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNAS 228
Query: 1812 XXXXXKCLHTLVGSTQIPTVILITEYAKSDSSNS--ATRDLEDIQSSLENAGACKMAFNP 1639
CL L STQIPT ILIT+Y K+DS+++ R LE++Q SLENAGACK+AFNP
Sbjct: 229 YRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGACKIAFNP 288
Query: 1638 LTVNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTN 1459
+T NSIKKTLSKICR+EQC + A+QID IAR SGGD+R+AITSLQYFCL P +LS + +
Sbjct: 289 ITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFS 348
Query: 1458 HP-----KDKAAELRMPNDGGALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLL 1294
P K+K+ EL +DG +L FGR+ETLSLFHALGKFLHNKRES N +A GQ +L+
Sbjct: 349 EPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLV 408
Query: 1293 REKFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADN 1114
RE+ RLPLKMDAPE+++CQA+ +AR + DFLHENVLDFLS+EA+D+A VASYL D+D
Sbjct: 409 RERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDF 468
Query: 1113 LLANFQGSTWSRMTNNYELESIRQSAAASVAVRGVLFGNSHPSPSRWHAIRSPKIWQVEQ 934
LLA +G + +YE ++ QSAAASVA RGVLFGNSHP SRWHAIR PK+WQVEQ
Sbjct: 469 LLAAHRG----MLATSYEAGNVLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQ 524
Query: 933 SSRHNKNEIVRQRYEACNSVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDE 754
SS HNK EI+ QR A + + ++ V+ATEY P+ +WL+ GA + Q +Q + +
Sbjct: 525 SSLHNKCEILGQRLVALS--TSNVSVIATEYIPIFKWLRYGASGGFEDYQALIQGNETEL 582
Query: 753 DMLDCDRLDSSEN----DEIEDW 697
D D LD EN DEIEDW
Sbjct: 583 DDNDSMILDEKENEISDDEIEDW 605
>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 533 bits (1374), Expect = e-149
Identities = 286/503 (56%), Positives = 359/503 (71%), Gaps = 11/503 (2%)
Frame = -3
Query: 2172 VQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLW 1993
V+++ W ++RL T +E++ ++L+ITGQAGVGKSAT+H IASHLGARL EWNTP PT+W
Sbjct: 110 VEEVTVWFEKRLRTSREEMC-NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIW 168
Query: 1992 QEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINXXXX 1813
QEH++N SG+ Y SKLDEFESFVER+RKY L+P G S N
Sbjct: 169 QEHLHNTNSGIRYTSKLDEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNAS 228
Query: 1812 XXXXXKCLHTLVGSTQIPTVILITEYAKSDSSNS--ATRDLEDIQSSLENAGACKMAFNP 1639
CL L STQIPT ILIT+Y K+DS+++ R LE++Q SLENAGACK+AFNP
Sbjct: 229 YRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGACKIAFNP 288
Query: 1638 LTVNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTN 1459
+T NSIKKTLSKICR+EQC + A+QID IAR SGGD+R+AITSLQYFCL P +LS + +
Sbjct: 289 ITSNSIKKTLSKICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFS 348
Query: 1458 HP-----KDKAAELRMPNDGGALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLL 1294
P K+K+ EL +DG +L FGR+ETLSLFHALGKFLHNKRES N +A GQ +L+
Sbjct: 349 EPARTYSKEKSDELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLV 408
Query: 1293 REKFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADN 1114
RE+ RLPLKMDAPE+++CQA+ +AR + DFLHENVLDFLS+EA+D+A VASYL D+D
Sbjct: 409 RERLTRLPLKMDAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDF 468
Query: 1113 LLANFQGSTWSRMTNNYELESIRQSAAASVAVRGVLFGNSHPSPSRWHAIRSPKIWQVEQ 934
LLA +G + +YE ++ QSAAASVA RGVLFGNSHP SRWHAIR PK+WQVEQ
Sbjct: 469 LLAAHRG----MLATSYEAGNVLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQ 524
Query: 933 SSRHNKNEIVRQRYEACNSVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDE 754
SS HNK EI+ QR A + + ++ V+ATEY P+ +WL+ GA + Q +Q + +
Sbjct: 525 SSLHNKCEILGQRLVALS--TSNVSVIATEYIPIFKWLRYGASGGFEDYQALIQGNETEL 582
Query: 753 DMLDCDRLDSSEN----DEIEDW 697
D D LD EN DEIEDW
Sbjct: 583 DDNDSMILDEKENEISDDEIEDW 605
>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 505 bits (1301), Expect = e-140
Identities = 272/503 (54%), Positives = 359/503 (71%), Gaps = 11/503 (2%)
Frame = -3
Query: 2172 VQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLW 1993
V+++K+W ++RL T K L +V++I G+AGVGKS T+ VIASH GARL EWNTPTPT+W
Sbjct: 118 VEEVKSWFEERLKTTKGNLINNVVVINGKAGVGKSTTIQVIASHFGARLCEWNTPTPTIW 177
Query: 1992 QEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXI-NXXX 1816
QEHV+N +G+ Y SKLDEF +F+E+IRKY L+P S V+PS + N
Sbjct: 178 QEHVHNTNTGIQYTSKLDEFVNFIEKIRKYGLIPSSS-SEDVKPSIILLIDDLPMTNGRV 236
Query: 1815 XXXXXXKCLHTLVGSTQIPTVILITEYAKSDSSNSATRDLEDIQSSLENAGACKMAFNPL 1636
CL LV STQ+PT IL+++Y ++DS++ R LE +Q SLENAGACK++FNP+
Sbjct: 237 AFERLQSCLLHLVRSTQLPTAILVSDYDEADSADHTARRLEQLQLSLENAGACKVSFNPI 296
Query: 1635 TVNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNH 1456
T NSIKKTLS+ICR+EQC++ EQ+D IA+ SGGDIR+AITSLQ FC+ P +L+ + +
Sbjct: 297 TNNSIKKTLSRICRQEQCSVTDEQLDLIAKGSGGDIRHAITSLQLFCVKPDLVLNGSYST 356
Query: 1455 PK---DKAAELRMPNDGGALSFGREETLSLFHALGKFLHNKRES--VNTVASGQNQYLLR 1291
P K ++ G +L FGR+ETLSLFHALGKFLHNKRE+ N + G + +L++
Sbjct: 357 PSYLYGKEDDIDALVSGISLLFGRDETLSLFHALGKFLHNKRETEVANAITPG-DAFLVQ 415
Query: 1290 EKFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNL 1111
E F+RLPLKMDAPEK++CQA+G+AR +TDFLHENVLDF+SDEA+D+AW V+SY D+D L
Sbjct: 416 ENFSRLPLKMDAPEKVLCQAHGQARPVTDFLHENVLDFISDEAMDDAWHVSSYFSDSDLL 475
Query: 1110 LANFQGSTWSRMTNNYELESIRQSAAASVAVRGVLFGNSHPSPSRWHAIRSPKIWQVEQS 931
L++F+G + E E++ QSAAASVAVRGVLFGNSHPSP RWHAIR PK+WQVE+S
Sbjct: 476 LSSFRG----MLARYNEAENVLQSAAASVAVRGVLFGNSHPSPPRWHAIRKPKLWQVEKS 531
Query: 930 SRHNKNEIVRQRYEACN-SVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDE 754
HN+ EIVRQR+ A N S S ++ +ATEY PLL+WL+ A + NQ + + D
Sbjct: 532 MLHNQKEIVRQRFIAYNGSSSCNVSDVATEYMPLLKWLEHRASGF-EDNQALVYCKKTDG 590
Query: 753 DMLDCDRLDSSE----NDEIEDW 697
+ D LD E +DEIE+W
Sbjct: 591 ESCDRMSLDDKESDISDDEIEEW 613
>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
gi|355523294|gb|AET03748.1| Cell cycle checkpoint protein
RAD17 [Medicago truncatula]
Length = 604
Score = 486 bits (1252), Expect = e-135
Identities = 257/499 (51%), Positives = 345/499 (69%), Gaps = 7/499 (1%)
Frame = -3
Query: 2172 VQQLKTWLKQRLLTPKEKLHGHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLW 1993
V+++KTW ++RL K +VL+++GQAG+GKSA +HVIASHLGA + WNTPTP +W
Sbjct: 113 VEEVKTWFEERLKPSKGVYRNNVLVVSGQAGIGKSAAIHVIASHLGAMVCGWNTPTPVIW 172
Query: 1992 QEHVYNLRSGLYYMSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINXXXX 1813
QEH+YN + Y SKLDEF SFVERIR + L+P G S ++
Sbjct: 173 QEHLYNSGTETKYTSKLDEFVSFVERIRTFGLIPTSFTGESKPSIIYLIDDLPMMHSKAA 232
Query: 1812 XXXXXKCLHTLVGSTQIPTVILITEYAKSDSSNSATRDLEDIQSSLENAGACKMAFNPLT 1633
CL+ LV +T+IPT IL+T+Y +DS++ R +E++++SLE++GACK+AFNP+T
Sbjct: 233 LGRLKDCLNLLVHTTRIPTAILVTDYGNTDSADYNARSVEELKTSLESSGACKIAFNPIT 292
Query: 1632 VNSIKKTLSKICREEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQL--LSSNTN 1459
VNSIKK L +IC+ EQC++ A+ +D IA+ SGGDIR+AITSLQ+FCL P Q+ LS +T
Sbjct: 293 VNSIKKILFRICQMEQCDVTADNVDLIAKASGGDIRHAITSLQFFCLNPNQVHSLSQSTR 352
Query: 1458 HPKDKAAELRMP---NDGGALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLLRE 1288
P E P +DG +L FGR+ETLSLFHALGKFLHNKRE+ V QN +L+ E
Sbjct: 353 SPHALKEESNKPVELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAVEYDQNGFLIHE 412
Query: 1287 KFARLPLKMDAPEKIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLL 1108
+F+RLPLKMD PEKI+CQ++ + + DFLHENVLDFL+DEAV++AW ++SYL DAD LL
Sbjct: 413 RFSRLPLKMDVPEKILCQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDADILL 472
Query: 1107 ANFQGSTWSRMTNNY-ELESIRQSAAASVAVRGVLFGNSHPSPSRWHAIRSPKIWQVEQS 931
+G M ++Y E ESI QSAAAS+AVRGVLFGNS P SRWHAIR PK+WQVE+
Sbjct: 473 TKLRG-----MVSSYNEAESILQSAAASIAVRGVLFGNSCPLSSRWHAIRRPKLWQVEKE 527
Query: 930 SRHNKNEIVRQRYEACNSV-SYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDE 754
+ KN+++RQR ACN + SY + VMATEY P+ + L G + + + ID+
Sbjct: 528 LSYQKNKMLRQRIPACNQLSSYHMSVMATEYMPMFK-LLGNRVGSGYDELHQESNIDIDK 586
Query: 753 DMLDCDRLDSSENDEIEDW 697
LD + ++ S+ D+IEDW
Sbjct: 587 MSLDGEAMEISD-DDIEDW 604
>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
Length = 1125
Score = 478 bits (1229), Expect = e-132
Identities = 264/485 (54%), Positives = 334/485 (68%), Gaps = 15/485 (3%)
Frame = -3
Query: 2109 HVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFE 1930
++L+ITGQAGVGKSAT+H I SHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFE
Sbjct: 211 NLLVITGQAGVGKSATIHAIVSHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 270
Query: 1929 SFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINXXXXXXXXXKCLHTLVGSTQIPTVI 1750
SFVER+RKY L+P G S N CL L STQIPT I
Sbjct: 271 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 330
Query: 1749 LITEYAKSDSSNS--ATRDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNL 1576
LIT+Y K+DS+++ R LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC +
Sbjct: 331 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 390
Query: 1575 EAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHP-----KDKAAELRMPNDGG 1411
A+QID IAR SGGDIR+AITSLQYFCL P +LS + + P K+K EL +DG
Sbjct: 391 TADQIDLIARSSGGDIRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKXDELNPLDDGF 450
Query: 1410 ALSFGREETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFAR-LPLKMDA---PEKI 1243
+L FGR+ETLSLFHALGKFLHNKRES N +A GQ +L+RE+ + +PLKM +
Sbjct: 451 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLDKIIPLKMTVLMLQKGF 510
Query: 1242 ICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNY 1063
+ + +AR + DFLHENVLDFLS+EA+D+A VASYL D+D LLA +G + +Y
Sbjct: 511 FVKQHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRG----MLATSY 566
Query: 1062 ELESIRQSAAASVAVRGVLFGNSHPSPSRWHAIRSPKIWQVEQSSRHNKNEIVRQRYEAC 883
E ++ QSAAASVA RGVLF NSHP SRWHAIR PK+WQVEQSS HNK EI+ QR A
Sbjct: 567 EAGNVLQSAAASVAARGVLFANSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVAL 626
Query: 882 NSVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQID----EDMLDCDRLDSSEN 715
+ + ++ V+ATEY P+ +WL+ GA + Q +Q + + + M+ ++ + +
Sbjct: 627 S--TSNVSVIATEYIPMFKWLRYGASGGFEDYQALIQGNETELXDNDSMILXEKENEISD 684
Query: 714 DEIED 700
DEIED
Sbjct: 685 DEIED 689