BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011834
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...   260   8e-67
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   260   8e-67
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...   240   7e-61
ref|XP_003530648.1| PREDICTED: uncharacterized protein LOC100812...   240   9e-61
ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arab...   238   2e-60

>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score =  260 bits (664), Expect = 8e-67
 Identities = 150/269 (55%), Positives = 173/269 (64%), Gaps = 18/269 (6%)
 Frame = +2

Query: 395  KEILSLFTSLQTQLFEAVAQLQEILDLQDAKQKILRDIRAKDSALLSFTKKIKEAEHXXX 574
            KEILSLFTSLQTQLFEAVA+LQEILDLQDAKQKI R+IR+KDSA+L+F  K+KEAE    
Sbjct: 125  KEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLD 184

Query: 575  XXXXXYSDYRHSKRSKSA------------IGTLHTLSDILSYAHRISYTTFAPPEFGAG 718
                 YSDYR  KRS +A            + +   LSDILSYAHRISYTTFAPPEFGAG
Sbjct: 185  ILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAG 244

Query: 719  QGPLRGALPPAPQEEQMRASLLYAFTDLDVGLPKVVETEERSIDALVEPSAMQPSEGIDL 898
            Q PLRGALPPAPQEEQMRAS LY F+DLDVGLPK V  +E++I+  +EP   QP++   L
Sbjct: 245  QAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPL 304

Query: 899  A---AIKGLIPSQFTVPSGWQPGM--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 1063
            A   +I+GL+P   TVPSGW+PGM                                   E
Sbjct: 305  ANLPSIQGLLPPNITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAE 364

Query: 1064 EQQPRPVTQMP-PRAPEPIQVQFVQLDIN 1147
            EQ PRP+      +APEPI V  VQLDIN
Sbjct: 365  EQLPRPLAAHGLQKAPEPIHVPHVQLDIN 393


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  260 bits (664), Expect = 8e-67
 Identities = 150/269 (55%), Positives = 173/269 (64%), Gaps = 18/269 (6%)
 Frame = +2

Query: 395  KEILSLFTSLQTQLFEAVAQLQEILDLQDAKQKILRDIRAKDSALLSFTKKIKEAEHXXX 574
            KEILSLFTSLQTQLFEAVA+LQEILDLQDAKQKI R+IR+KDSA+L+F  K+KEAE    
Sbjct: 1159 KEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLD 1218

Query: 575  XXXXXYSDYRHSKRSKSA------------IGTLHTLSDILSYAHRISYTTFAPPEFGAG 718
                 YSDYR  KRS +A            + +   LSDILSYAHRISYTTFAPPEFGAG
Sbjct: 1219 ILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAG 1278

Query: 719  QGPLRGALPPAPQEEQMRASLLYAFTDLDVGLPKVVETEERSIDALVEPSAMQPSEGIDL 898
            Q PLRGALPPAPQEEQMRAS LY F+DLDVGLPK V  +E++I+  +EP   QP++   L
Sbjct: 1279 QAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPL 1338

Query: 899  A---AIKGLIPSQFTVPSGWQPGM--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 1063
            A   +I+GL+P   TVPSGW+PGM                                   E
Sbjct: 1339 ANLPSIQGLLPPNITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAE 1398

Query: 1064 EQQPRPVTQMP-PRAPEPIQVQFVQLDIN 1147
            EQ PRP+      +APEPI V  VQLDIN
Sbjct: 1399 EQLPRPLAAHGLQKAPEPIHVPHVQLDIN 1427


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Cucumis sativus] gi|449520010|ref|XP_004167027.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4-like [Cucumis sativus]
          Length = 404

 Score =  240 bits (613), Expect = 7e-61
 Identities = 139/266 (52%), Positives = 168/266 (63%), Gaps = 15/266 (5%)
 Frame = +2

Query: 392  AKEILSLFTSLQTQLFEAVAQLQEILDLQDAKQKILRDIRAKDSALLSFTKKIKEAEHXX 571
            +KEILSLF  LQTQLFEAVA+LQEILDLQD+KQKI  +IRAKD+AL +F  K+KEAE   
Sbjct: 119  SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL 178

Query: 572  XXXXXXYSDYRHSKRSKS------------AIGTLHTLSDILSYAHRISYTTFAPPEFGA 715
                  Y+DY+  +R K+             + +   LSDILSYAHRISYTTFAPPEFGA
Sbjct: 179  DVLFDDYADYQRPRRDKTEGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGA 238

Query: 716  GQGPLRGALPPAPQEEQMRASLLYAFTDLDVGLPKVVETEERSIDALVEPSAMQPSEGID 895
            GQ PLRGALPPAPQ+EQMRAS LY F +LDVGLPK VE+ E++I+ ++EP A    +   
Sbjct: 239  GQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANP 298

Query: 896  LAAIKGLIPSQFTVPSGWQPGM-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQQ 1072
            LAAI+GL+P   TVPSGW+PGM                                  +E Q
Sbjct: 299  LAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ 358

Query: 1073 PRPVTQMP--PRAPEPIQVQFVQLDI 1144
             RP   +P   + PEPIQV+ VQLDI
Sbjct: 359  LRP-NALPGLHKPPEPIQVRHVQLDI 383


>ref|XP_003530648.1| PREDICTED: uncharacterized protein LOC100812071 [Glycine max]
          Length = 388

 Score =  240 bits (612), Expect = 9e-61
 Identities = 141/262 (53%), Positives = 168/262 (64%), Gaps = 11/262 (4%)
 Frame = +2

Query: 392  AKEILSLFTSLQTQLFEAVAQLQEILDLQDAKQKILRDIRAKDSALLSFTKKIKEAEHXX 571
            AKEI+SLFT LQTQ+FEAVA+LQEILDLQDAKQKI R+IR++DS LL+F  K+KEAE   
Sbjct: 112  AKEIISLFTVLQTQIFEAVAELQEILDLQDAKQKIDREIRSQDSTLLAFANKLKEAESCL 171

Query: 572  XXXXXXYSDYRHSKRSKSA---------IGTLHTLSDILSYAHRISYTTFAPPEFGAGQG 724
                  YSDYR SKRSKS          + +   LSDILSYAHRISYTTFAPPEFGAGQ 
Sbjct: 172  DILVDDYSDYRRSKRSKSGDDDSMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQA 231

Query: 725  PLRGALPPAPQEEQMRASLLYAFTDLDVGLPKVVETEERSIDALVEPSAMQPSEGI-DLA 901
            PLRGALPPAPQEEQMRAS LY F DLDVGLPK VET+E+ ++A+VEP     +  + +L+
Sbjct: 232  PLRGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQVDTNAVPNLS 291

Query: 902  AIKGLIPSQFTVPSGWQPGM-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQQPR 1078
            A +G++P    +P GW+PGM                                   EQQ +
Sbjct: 292  AFQGMLP---PMPPGWKPGMPVQLPIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQMQ 348

Query: 1079 PVTQMPPRAPEPIQVQFVQLDI 1144
            P     P+ PE IQVQ V LD+
Sbjct: 349  PHIPQ-PKQPEVIQVQPVNLDL 369


>ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
            lyrata] gi|297316830|gb|EFH47252.1| hypothetical protein
            ARALYDRAFT_487063 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score =  238 bits (608), Expect = 2e-60
 Identities = 135/268 (50%), Positives = 164/268 (61%), Gaps = 18/268 (6%)
 Frame = +2

Query: 395  KEILSLFTSLQTQLFEAVAQLQEILDLQDAKQKILRDIRAKDSALLSFTKKIKEAEHXXX 574
            KEILS F SLQTQLFEAV +LQEILDLQDAKQK+ R+I+++DS+LL+F  K+K+AE    
Sbjct: 142  KEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSRDSSLLAFANKLKDAERVLD 201

Query: 575  XXXXXYSDYRHSKRSK-----------------SAIGTLHTLSDILSYAHRISYTTFAPP 703
                 YSDYR  KRSK                 + + +   L DIL+YAH+ISYTTFAPP
Sbjct: 202  MLVEDYSDYRKPKRSKIVSEEEEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPP 261

Query: 704  EFGAGQGPLRGALPPAPQEEQMRASLLYAFTDLDVGLPKVVETEERSIDALVEPSAMQPS 883
            EFGAGQ PLRGALPPAPQ+EQMRAS LYAF DLD+GLPK VE  E+ ++AL+EP    P 
Sbjct: 262  EFGAGQAPLRGALPPAPQDEQMRASQLYAFADLDIGLPKTVENMEKKVEALIEPPP-PPP 320

Query: 884  EGIDLAAIKGLIPSQFTVPSGWQPGM-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1060
            E +D++AI  L+P    VPSGW+PGM                                  
Sbjct: 321  EAMDISAIHNLLPPNIAVPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAPRA 380

Query: 1061 EEQQPRPVTQMPPRAPEPIQVQFVQLDI 1144
            E+QQ     Q   R P+ IQV+ VQLDI
Sbjct: 381  EDQQHMRPPQGLHRPPDVIQVRAVQLDI 408