BLASTX nr result

ID: Coptis25_contig00011811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011811
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540158.1| PREDICTED: transmembrane 9 superfamily membe...   104   9e-21
ref|XP_003532994.1| PREDICTED: transmembrane 9 superfamily membe...   104   9e-21
ref|XP_004146261.1| PREDICTED: transmembrane 9 superfamily membe...   103   2e-20
ref|XP_003531298.1| PREDICTED: transmembrane 9 superfamily membe...   103   2e-20
ref|XP_003524235.1| PREDICTED: transmembrane 9 superfamily membe...   103   2e-20

>ref|XP_003540158.1| PREDICTED: transmembrane 9 superfamily member 3-like [Glycine max]
          Length = 584

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/67 (80%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   FNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRSP 182
           FNSFMMVIFLTGLVSMILMRTLRNDYAKYA            VSEESGWKLVHGDVFR P
Sbjct: 221 FNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLETLERDVSEESGWKLVHGDVFRPP 280

Query: 183 RSLVILS 203
           RSLVILS
Sbjct: 281 RSLVILS 287


>ref|XP_003532994.1| PREDICTED: transmembrane 9 superfamily member 3-like [Glycine max]
          Length = 585

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/67 (80%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   FNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRSP 182
           FNSFMMVIFLTGLVSMILMRTLRNDYAKYA            VSEESGWKLVHGDVFR P
Sbjct: 222 FNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLETLERDVSEESGWKLVHGDVFRPP 281

Query: 183 RSLVILS 203
           RSLVILS
Sbjct: 282 RSLVILS 288


>ref|XP_004146261.1| PREDICTED: transmembrane 9 superfamily member 3-like [Cucumis
           sativus] gi|449495547|ref|XP_004159874.1| PREDICTED:
           transmembrane 9 superfamily member 3-like [Cucumis
           sativus]
          Length = 593

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/67 (79%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   FNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRSP 182
           FNSFMMVIFLTGLVSMILMRTLRNDYAKYA            VSEESGWKLVHGDVFR P
Sbjct: 230 FNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLETLERDVSEESGWKLVHGDVFRPP 289

Query: 183 RSLVILS 203
           R+LVILS
Sbjct: 290 RNLVILS 296


>ref|XP_003531298.1| PREDICTED: transmembrane 9 superfamily member 3-like [Glycine max]
          Length = 590

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/67 (79%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   FNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRSP 182
           FNSFMMVIFLTGLVSMILMRTLRNDYAKYA            VSEESGWKLVHGDVFR P
Sbjct: 227 FNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPP 286

Query: 183 RSLVILS 203
           R+LVILS
Sbjct: 287 RNLVILS 293


>ref|XP_003524235.1| PREDICTED: transmembrane 9 superfamily member 3-like [Glycine max]
          Length = 590

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/67 (79%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   FNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRSP 182
           FNSFMMVIFLTGLVSMILMRTLRNDYAKYA            VSEESGWKLVHGDVFR P
Sbjct: 227 FNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPP 286

Query: 183 RSLVILS 203
           R+LVILS
Sbjct: 287 RNLVILS 293


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