BLASTX nr result
ID: Coptis25_contig00011781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011781
(558 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514629.1| Protein COBRA precursor, putative [Ricinus c... 175 1e-76
ref|XP_002305390.1| predicted protein [Populus trichocarpa] gi|2... 173 1e-76
ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|1... 175 5e-76
gb|AFZ78568.1| COBRA-like protein [Populus tomentosa] 171 6e-76
ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativ... 174 1e-75
>ref|XP_002514629.1| Protein COBRA precursor, putative [Ricinus communis]
gi|223546233|gb|EEF47735.1| Protein COBRA precursor,
putative [Ricinus communis]
Length = 383
Score = 175 bits (443), Expect(2) = 1e-76
Identities = 75/93 (80%), Positives = 82/93 (88%)
Frame = -1
Query: 558 IFNFQKYRHIQAPGWTLGWEWSKKEVIWSMTGAQATEQGDCSRFKGNVPHCCLRKPFVVD 379
++NFQ+YRHIQAPGWTLGW W+KKEVIWSM GAQ TEQGDCS+FKGNVPHCC + P VVD
Sbjct: 63 MYNFQQYRHIQAPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKDPTVVD 122
Query: 378 LLPGTPYNQQVANCCKGGVITSWIQDRDNAVSS 280
LLPGTPYNQQ+ANCCKGGVI SW QD AVSS
Sbjct: 123 LLPGTPYNQQIANCCKGGVINSWAQDPATAVSS 155
Score = 137 bits (345), Expect(2) = 1e-76
Identities = 60/79 (75%), Positives = 72/79 (91%)
Frame = -2
Query: 239 FQISVGSAGTTNKTVRAPKNFTLKVPGPGYTCEKTKLVKPSQFVSPDKRRVTQAVLTWNS 60
FQ+SVG+AGT+NKTVR PKNFTLK PGPGYTC K+V+P++FV+PDKRRVTQA++TWN
Sbjct: 156 FQVSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRPTKFVTPDKRRVTQALMTWNV 215
Query: 59 TCTYSQILAQQTPSCCVSL 3
TCTYSQ LAQ+TP+CCVSL
Sbjct: 216 TCTYSQFLAQKTPTCCVSL 234
>ref|XP_002305390.1| predicted protein [Populus trichocarpa] gi|222848354|gb|EEE85901.1|
predicted protein [Populus trichocarpa]
Length = 453
Score = 173 bits (439), Expect(2) = 1e-76
Identities = 74/93 (79%), Positives = 82/93 (88%)
Frame = -1
Query: 558 IFNFQKYRHIQAPGWTLGWEWSKKEVIWSMTGAQATEQGDCSRFKGNVPHCCLRKPFVVD 379
I+NFQ+YRHIQAPGW+LGW W+KKEVIWSM G QAT+QGDCS+FKGNVPHCC + P VVD
Sbjct: 63 IYNFQQYRHIQAPGWSLGWTWAKKEVIWSMLGGQATDQGDCSKFKGNVPHCCKKSPTVVD 122
Query: 378 LLPGTPYNQQVANCCKGGVITSWIQDRDNAVSS 280
LLPGTPYNQQ ANCCKGGVI+SW QD NA SS
Sbjct: 123 LLPGTPYNQQTANCCKGGVISSWAQDPANAASS 155
Score = 138 bits (348), Expect(2) = 1e-76
Identities = 61/79 (77%), Positives = 72/79 (91%)
Frame = -2
Query: 239 FQISVGSAGTTNKTVRAPKNFTLKVPGPGYTCEKTKLVKPSQFVSPDKRRVTQAVLTWNS 60
FQ+SVGSAGT+NKTVR PKNFTLK PGPGYTC + K+VKP++F+S DKRR+TQA++TWN
Sbjct: 156 FQLSVGSAGTSNKTVRLPKNFTLKAPGPGYTCARAKIVKPTRFMSTDKRRITQALMTWNV 215
Query: 59 TCTYSQILAQQTPSCCVSL 3
TCTYSQ LAQ+TPSCCVSL
Sbjct: 216 TCTYSQFLAQKTPSCCVSL 234
>ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|118482010|gb|ABK92936.1|
unknown [Populus trichocarpa]
gi|222871273|gb|EEF08404.1| predicted protein [Populus
trichocarpa]
Length = 457
Score = 175 bits (444), Expect(2) = 5e-76
Identities = 74/93 (79%), Positives = 83/93 (89%)
Frame = -1
Query: 558 IFNFQKYRHIQAPGWTLGWEWSKKEVIWSMTGAQATEQGDCSRFKGNVPHCCLRKPFVVD 379
++NFQ+YRHIQAPGWTLGW W+KKEVIW+M GAQ TEQGDCS+FKGN+PHCC + P VVD
Sbjct: 66 MYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVD 125
Query: 378 LLPGTPYNQQVANCCKGGVITSWIQDRDNAVSS 280
LLPGTPYNQQ+ANCCKGGVI SW QD NAVSS
Sbjct: 126 LLPGTPYNQQIANCCKGGVINSWAQDPANAVSS 158
Score = 134 bits (338), Expect(2) = 5e-76
Identities = 59/79 (74%), Positives = 70/79 (88%)
Frame = -2
Query: 239 FQISVGSAGTTNKTVRAPKNFTLKVPGPGYTCEKTKLVKPSQFVSPDKRRVTQAVLTWNS 60
FQISVG+AGTTNKTVR PKN TLK PGPGYTC K+V+P++F+S DKRR+TQA++TWN
Sbjct: 159 FQISVGAAGTTNKTVRVPKNITLKAPGPGYTCGPAKIVRPTKFISADKRRITQALMTWNI 218
Query: 59 TCTYSQILAQQTPSCCVSL 3
TCTYSQ LAQ+TP+CCVSL
Sbjct: 219 TCTYSQFLAQKTPTCCVSL 237
>gb|AFZ78568.1| COBRA-like protein [Populus tomentosa]
Length = 453
Score = 171 bits (433), Expect(2) = 6e-76
Identities = 72/93 (77%), Positives = 81/93 (87%)
Frame = -1
Query: 558 IFNFQKYRHIQAPGWTLGWEWSKKEVIWSMTGAQATEQGDCSRFKGNVPHCCLRKPFVVD 379
I+NFQ+YRHIQAPGW+LGW W+KKEVIWSM G QAT+QGDCS+FKGN+PHCC + P VVD
Sbjct: 63 IYNFQQYRHIQAPGWSLGWTWAKKEVIWSMLGGQATDQGDCSKFKGNIPHCCKKSPTVVD 122
Query: 378 LLPGTPYNQQVANCCKGGVITSWIQDRDNAVSS 280
LLPG PYNQQ ANCCKGGVI+SW QD NA SS
Sbjct: 123 LLPGIPYNQQTANCCKGGVISSWAQDSANAASS 155
Score = 138 bits (348), Expect(2) = 6e-76
Identities = 61/79 (77%), Positives = 72/79 (91%)
Frame = -2
Query: 239 FQISVGSAGTTNKTVRAPKNFTLKVPGPGYTCEKTKLVKPSQFVSPDKRRVTQAVLTWNS 60
FQ+SVGSAGT+NKTVR PKNFTLK PGPGYTC + K+VKP++F+S DKRR+TQA++TWN
Sbjct: 156 FQLSVGSAGTSNKTVRLPKNFTLKAPGPGYTCARAKIVKPTRFMSTDKRRITQALMTWNV 215
Query: 59 TCTYSQILAQQTPSCCVSL 3
TCTYSQ LAQ+TPSCCVSL
Sbjct: 216 TCTYSQFLAQKTPSCCVSL 234
>ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativus]
gi|449529459|ref|XP_004171717.1| PREDICTED: protein
COBRA-like [Cucumis sativus]
Length = 455
Score = 174 bits (440), Expect(2) = 1e-75
Identities = 74/93 (79%), Positives = 81/93 (87%)
Frame = -1
Query: 558 IFNFQKYRHIQAPGWTLGWEWSKKEVIWSMTGAQATEQGDCSRFKGNVPHCCLRKPFVVD 379
++NFQ+YRHIQAPGWTLGW W+KKEVIWSM G+Q TEQGDCSRFKGN PHCC + P VVD
Sbjct: 66 MYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSRFKGNTPHCCKKDPTVVD 125
Query: 378 LLPGTPYNQQVANCCKGGVITSWIQDRDNAVSS 280
LLPGTPYNQQ+ANCCKGGVI SW QD NA SS
Sbjct: 126 LLPGTPYNQQIANCCKGGVINSWAQDPANAASS 158
Score = 135 bits (339), Expect(2) = 1e-75
Identities = 60/79 (75%), Positives = 71/79 (89%)
Frame = -2
Query: 239 FQISVGSAGTTNKTVRAPKNFTLKVPGPGYTCEKTKLVKPSQFVSPDKRRVTQAVLTWNS 60
FQ+SVGSAGT+NKTV+ PKNFTLK PGPGYTC K+V+P++FVS DKRRVTQA++TWN
Sbjct: 159 FQVSVGSAGTSNKTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFVSGDKRRVTQALMTWNV 218
Query: 59 TCTYSQILAQQTPSCCVSL 3
TCTYSQ LAQ+TP+CCVSL
Sbjct: 219 TCTYSQFLAQKTPTCCVSL 237