BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011770
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   131   2e-28
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              131   2e-28
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   126   8e-27
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   126   8e-27
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   123   7e-26

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  131 bits (330), Expect = 2e-28
 Identities = 62/111 (55%), Positives = 77/111 (69%)
 Frame = -2

Query: 1047 FNRATEVWESMEQRGYYAPVSTYAVMIHGLCKKKGKVEDAYHYFEMMIDEGLPPYPCTCE 868
            F+R T+VW  ME+RG+Y   STYAVM+HG CKKKGK+E+A  YFEMMID+G+PPY CT E
Sbjct: 410  FDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVE 469

Query: 867  XXXXXXXXXGFREKTQILTDKMLQSTSCSIQELSKIMAGDKVYKELSSEEE 715
                     GF E+  +L  KM +STSC IQELS +M G+K    L SEE+
Sbjct: 470  LLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQ 520


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  131 bits (330), Expect = 2e-28
 Identities = 62/111 (55%), Positives = 77/111 (69%)
 Frame = -2

Query: 1047 FNRATEVWESMEQRGYYAPVSTYAVMIHGLCKKKGKVEDAYHYFEMMIDEGLPPYPCTCE 868
            F+R T+VW  ME+RG+Y   STYAVM+HG CKKKGK+E+A  YFEMMID+G+PPY CT E
Sbjct: 383  FDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVE 442

Query: 867  XXXXXXXXXGFREKTQILTDKMLQSTSCSIQELSKIMAGDKVYKELSSEEE 715
                     GF E+  +L  KM +STSC IQELS +M G+K    L SEE+
Sbjct: 443  LLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQ 493


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  126 bits (317), Expect = 8e-27
 Identities = 62/101 (61%), Positives = 75/101 (74%)
 Frame = -2

Query: 1047 FNRATEVWESMEQRGYYAPVSTYAVMIHGLCKKKGKVEDAYHYFEMMIDEGLPPYPCTCE 868
            F+RA EVWESM +RG+Y  VSTYAVMIHG CKKK K+E+A  YFEMMIDEG+PPY  T E
Sbjct: 411  FDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVE 470

Query: 867  XXXXXXXXXGFREKTQILTDKMLQSTSCSIQELSKIMAGDK 745
                     GF+++  IL DKM +STSCSIQEL+ +M+G K
Sbjct: 471  LLRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGK 511


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  126 bits (317), Expect = 8e-27
 Identities = 62/101 (61%), Positives = 75/101 (74%)
 Frame = -2

Query: 1047 FNRATEVWESMEQRGYYAPVSTYAVMIHGLCKKKGKVEDAYHYFEMMIDEGLPPYPCTCE 868
            F+RA EVWESM +RG+Y  VSTYAVMIHG CKKK K+E+A  YFEMMIDEG+PPY  T E
Sbjct: 411  FDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVE 470

Query: 867  XXXXXXXXXGFREKTQILTDKMLQSTSCSIQELSKIMAGDK 745
                     GF+++  IL DKM +STSCSIQEL+ +M+G K
Sbjct: 471  LLRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGK 511


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  123 bits (309), Expect = 7e-26
 Identities = 62/110 (56%), Positives = 76/110 (69%)
 Frame = -2

Query: 1047 FNRATEVWESMEQRGYYAPVSTYAVMIHGLCKKKGKVEDAYHYFEMMIDEGLPPYPCTCE 868
            F+RA EVWESM ++G+Y  VSTY+VM+HGLCKKKGK+E+A  YFEMMIDEG+PPY  T E
Sbjct: 404  FDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVE 463

Query: 867  XXXXXXXXXGFREKTQILTDKMLQSTSCSIQELSKIMAGDKVYKELSSEE 718
                     G  +  +IL  KM  ST+CSIQEL+  M G KV+    SEE
Sbjct: 464  ILRNRLIGLGLLDYIEILAGKMEHSTACSIQELAIAMRGGKVHVRSRSEE 513