BLASTX nr result

ID: Coptis25_contig00011768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011768
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791...   463   e-128
ref|XP_002510442.1| glycosyltransferase, putative [Ricinus commu...   463   e-128
gb|ACU24642.1| unknown [Glycine max]                                  455   e-126
ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125
ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidas...   452   e-125

>ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791337 [Glycine max]
          Length = 464

 Score =  463 bits (1191), Expect = e-128
 Identities = 229/262 (87%), Positives = 252/262 (96%)
 Frame = +2

Query: 2   GAMIDSHTTTEYWRNRTRERLGIKMPQTYAVHLGNSKELMEVAEDSVAKRVLREHVRESL 181
           GAMIDSHTT EYW+NRTRERLGI+MP+TY VHLGNSKELMEVAEDSVAKRVLREHVRESL
Sbjct: 202 GAMIDSHTTAEYWKNRTRERLGIEMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRESL 261

Query: 182 GVRNDDILFAIINSVSRGKGQDLFLRAFHESLELIKEKKLQVPLMHAVVVGSDMNAQTKF 361
           GVRNDD+LFAIINSVSRGKGQDLFLR+F+ESL+LI+EKKLQ+P +HAV+VGSDMNAQTKF
Sbjct: 262 GVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQLPFLHAVIVGSDMNAQTKF 321

Query: 362 EMELRNFIAEKRIQDRVHFVNKTLTVSPYLAAIDVLVQNSQGRGECFGRITIEAMAFQLP 541
           EMELR F+ EK+IQ+RVHFVNKTL V+PYLAAIDVLVQNSQ RGECFGRITIEAMAF+LP
Sbjct: 322 EMELRKFVVEKKIQNRVHFVNKTLAVAPYLAAIDVLVQNSQARGECFGRITIEAMAFRLP 381

Query: 542 VLGTAAGGTNEIVVNGSTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMGKKGYERVKER 721
           VLGTAAGGT EIVVNG+TGLLHPVGKEGVTPLAKNIVKLA+HVE+RLTMGKKGYERVKER
Sbjct: 382 VLGTAAGGTMEIVVNGTTGLLHPVGKEGVTPLAKNIVKLASHVEKRLTMGKKGYERVKER 441

Query: 722 FMEQHMAHRISLVLKEVLKKAK 787
           F+E HM+ RI+LVLKEVL+KAK
Sbjct: 442 FLEHHMSQRIALVLKEVLQKAK 463


>ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis]
            gi|223551143|gb|EEF52629.1| glycosyltransferase, putative
            [Ricinus communis]
          Length = 477

 Score =  463 bits (1191), Expect = e-128
 Identities = 230/263 (87%), Positives = 251/263 (95%)
 Frame = +2

Query: 2    GAMIDSHTTTEYWRNRTRERLGIKMPQTYAVHLGNSKELMEVAEDSVAKRVLREHVRESL 181
            GAMIDSHTT EYW+NRTRERLGIKMP+TY VHLGNSK+LMEVAEDSVAKRVL EHVRESL
Sbjct: 215  GAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKDLMEVAEDSVAKRVLCEHVRESL 274

Query: 182  GVRNDDILFAIINSVSRGKGQDLFLRAFHESLELIKEKKLQVPLMHAVVVGSDMNAQTKF 361
            GVRNDD+LFAIINSVSRGKGQDLFLR+F+ESL+LI+EKKL+VP +HAVVVGSDMNAQTKF
Sbjct: 275  GVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLKVPSLHAVVVGSDMNAQTKF 334

Query: 362  EMELRNFIAEKRIQDRVHFVNKTLTVSPYLAAIDVLVQNSQGRGECFGRITIEAMAFQLP 541
            EMELR F+ EK+IQDRVHFVNKTLTV+PYLA+IDVLVQNSQ RGECFGRITIEAMAFQLP
Sbjct: 335  EMELRKFVQEKKIQDRVHFVNKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLP 394

Query: 542  VLGTAAGGTNEIVVNGSTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMGKKGYERVKER 721
            VLGTAAGGT EIVVNG+TGLLHP GKEGVTPLA NIVKLATHVERRLTMGK GY+RVKER
Sbjct: 395  VLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLANNIVKLATHVERRLTMGKNGYKRVKER 454

Query: 722  FMEQHMAHRISLVLKEVLKKAKS 790
            F+E HM+HRI+LVLKEVL+KAK+
Sbjct: 455  FLEHHMSHRIALVLKEVLRKAKT 477


>gb|ACU24642.1| unknown [Glycine max]
          Length = 463

 Score =  455 bits (1171), Expect = e-126
 Identities = 228/260 (87%), Positives = 246/260 (94%)
 Frame = +2

Query: 2   GAMIDSHTTTEYWRNRTRERLGIKMPQTYAVHLGNSKELMEVAEDSVAKRVLREHVRESL 181
           GAMIDSHTT EYW+NRTRERLGIKMP+TY VHLGNSKELMEVAEDSVAKRVLREHVR+SL
Sbjct: 200 GAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRQSL 259

Query: 182 GVRNDDILFAIINSVSRGKGQDLFLRAFHESLELIKEKKLQVPLMHAVVVGSDMNAQTKF 361
           GVRNDD+LFAIINSVSRGKGQDLFLR+F+ESL LI+EKKLQVP +HA+VVGSDMNAQTKF
Sbjct: 260 GVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQEKKLQVPSLHAIVVGSDMNAQTKF 319

Query: 362 EMELRNFIAEKRIQDRVHFVNKTLTVSPYLAAIDVLVQNSQGRGECFGRITIEAMAFQLP 541
           E ELR F+ EK+IQDRVHFVNKTL V+PYLA+IDVLVQNSQ RGECFGRITIEAMAF+LP
Sbjct: 320 ETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLP 379

Query: 542 VLGTAAGGTNEIVVNGSTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMGKKGYERVKER 721
           VLGTAAGGT EIVVN +TGLLHPVGKEGVTPLAKNIV LATHVERRLTMGKKGYERVKER
Sbjct: 380 VLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNIVNLATHVERRLTMGKKGYERVKER 439

Query: 722 FMEQHMAHRISLVLKEVLKK 781
           F+E HMA RI+LVLKEVL+K
Sbjct: 440 FLEPHMAQRIALVLKEVLRK 459


>ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|222836765|gb|EEE75158.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  454 bits (1168), Expect = e-125
 Identities = 224/266 (84%), Positives = 250/266 (93%)
 Frame = +2

Query: 2    GAMIDSHTTTEYWRNRTRERLGIKMPQTYAVHLGNSKELMEVAEDSVAKRVLREHVRESL 181
            GAMIDSH T EYW+NRT+ERL IKMP+TY VHLGNSKELMEVAEDSVAKRVLREH+RESL
Sbjct: 215  GAMIDSHVTAEYWKNRTQERLRIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHIRESL 274

Query: 182  GVRNDDILFAIINSVSRGKGQDLFLRAFHESLELIKEKKLQVPLMHAVVVGSDMNAQTKF 361
            GVR++DILFAIINSVSRGKGQDLFLR+F+ESL++I+ KKL+VP MHAV+VGSDM+AQTKF
Sbjct: 275  GVRDEDILFAIINSVSRGKGQDLFLRSFYESLQIIQVKKLKVPSMHAVIVGSDMSAQTKF 334

Query: 362  EMELRNFIAEKRIQDRVHFVNKTLTVSPYLAAIDVLVQNSQGRGECFGRITIEAMAFQLP 541
            E ELRN++ +K IQDRVHF+NKTLTV+PYLAAIDVLVQNSQ RGECFGRITIEAMAFQLP
Sbjct: 335  ETELRNYVMQKNIQDRVHFINKTLTVAPYLAAIDVLVQNSQARGECFGRITIEAMAFQLP 394

Query: 542  VLGTAAGGTNEIVVNGSTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMGKKGYERVKER 721
            VLGTAAGGT EIVVNG+TGLLH VGKEGVTPLAKNIVKLATHVERRLTMGK+GYERV+E 
Sbjct: 395  VLGTAAGGTTEIVVNGTTGLLHSVGKEGVTPLAKNIVKLATHVERRLTMGKRGYERVREM 454

Query: 722  FMEQHMAHRISLVLKEVLKKAKSH*H 799
            F+E HMAHRI+ VLKEVL+K+KSH H
Sbjct: 455  FLEHHMAHRIASVLKEVLRKSKSHPH 480


>ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]
          Length = 833

 Score =  452 bits (1162), Expect = e-125
 Identities = 226/259 (87%), Positives = 245/259 (94%)
 Frame = +2

Query: 2   GAMIDSHTTTEYWRNRTRERLGIKMPQTYAVHLGNSKELMEVAEDSVAKRVLREHVRESL 181
           GAMIDSHTT EYW+NRTRERLGIKMP+TY VHLGNSKELMEVAEDSVAKRVLREHVR+SL
Sbjct: 200 GAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRQSL 259

Query: 182 GVRNDDILFAIINSVSRGKGQDLFLRAFHESLELIKEKKLQVPLMHAVVVGSDMNAQTKF 361
           GVRNDD+LFAIINSVSRGKGQDLFLR+F+ESL LI+EKKLQVP +HA+VVGSDMNAQTKF
Sbjct: 260 GVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQEKKLQVPSLHAIVVGSDMNAQTKF 319

Query: 362 EMELRNFIAEKRIQDRVHFVNKTLTVSPYLAAIDVLVQNSQGRGECFGRITIEAMAFQLP 541
           E ELR F+ EK+IQDRVHFVNKTL V+PYLA+IDVLVQNSQ RGECFGRITIEAMAF+LP
Sbjct: 320 ETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLP 379

Query: 542 VLGTAAGGTNEIVVNGSTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMGKKGYERVKER 721
           VLGTAAGGT EIVVN +TGLLHPVGKEGVTPLAKNIV LATHVERRLTMGKKGYERVKER
Sbjct: 380 VLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNIVNLATHVERRLTMGKKGYERVKER 439

Query: 722 FMEQHMAHRISLVLKEVLK 778
           F+E HMA RI+LVLKE+L+
Sbjct: 440 FLEPHMAQRIALVLKELLQ 458


Top