BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011764
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   363   8e-98
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         359   1e-96
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         354   4e-95
ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]     340   5e-91
ref|XP_004155401.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]     340   5e-91

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3|
            unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  363 bits (932), Expect = 8e-98
 Identities = 189/287 (65%), Positives = 222/287 (77%)
 Frame = +3

Query: 150  MSLSCSDCFSDLICSEDARTLXXXXXXXXXXXXXPDGIEESIAEFVEGEGTHEPLEFDYM 329
            MSLS SD FSDL+C ED+  L             P  IEESIA F+E E    P  FDY+
Sbjct: 1    MSLSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVP-GFDYL 59

Query: 330  ARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPLQ 509
            ARF+S SLD SAR++SV+WILKVQA+  FQPLTAYL+VNY+DRFL  R LPQ NG WPLQ
Sbjct: 60   ARFRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNG-WPLQ 118

Query: 510  LLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRMELLVLGTLDWRLRSITPFT 689
            LLSVACLSLA KMEE LVPSLLDLQVEG KFIFE +TI RMELLVLG LDWRLRSITPF+
Sbjct: 119  LLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFS 178

Query: 690  FMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISFLDYSPSSIAVASLLHAANEFPNLS 869
            F+ FFAYK+DS+G+ IGFL+SRAT+II+  I+E SFL+Y PS IA A++L AANE P LS
Sbjct: 179  FIGFFAYKLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLS 238

Query: 870  FITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQRKPPKVLPQLRV 1010
             + P  A +WC GL K++I++CYQLMQE+ V   +RKPPK+LPQLRV
Sbjct: 239  LVDPERAESWCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRV 285


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  359 bits (922), Expect = 1e-96
 Identities = 186/295 (63%), Positives = 225/295 (76%), Gaps = 8/295 (2%)
 Frame = +3

Query: 150  MSLSCSDCFSD-----LICSEDARTLXXXXXXXXXXXXXPDGIE---ESIAEFVEGEGTH 305
            MS+SCS+CF D     L+C ED+  +             P   E   ESIA F+E E   
Sbjct: 1    MSVSCSNCFPDDDDSFLLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNF 60

Query: 306  EPLEFDYMARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQ 485
             P  F+Y+ RFQS+SLD SAR++SV+WILKVQA++ FQPLTAYL+VNY+DRFL  R LPQ
Sbjct: 61   VP-GFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLPQ 119

Query: 486  ANGSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRMELLVLGTLDWR 665
             NG WPLQLLSVACLSLA KMEE LVPSLLDLQVEG K++FEP+TI RMELLVLG LDWR
Sbjct: 120  TNG-WPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWR 178

Query: 666  LRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISFLDYSPSSIAVASLLHA 845
            LRS+TPF+F+DFFA K+DS+GT  GFL+SRAT+II+  I+E SFL Y PS IA AS+LHA
Sbjct: 179  LRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHA 238

Query: 846  ANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQRKPPKVLPQLRV 1010
            ANE PN SF+ P +A +WC GL K++++ CYQLMQE+V+   +RKPPKVLPQLRV
Sbjct: 239  ANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRV 293


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  354 bits (909), Expect = 4e-95
 Identities = 182/293 (62%), Positives = 221/293 (75%), Gaps = 6/293 (2%)
 Frame = +3

Query: 150  MSLSCSDCFSD-----LICSEDAR-TLXXXXXXXXXXXXXPDGIEESIAEFVEGEGTHEP 311
            MS+SCS+CF D     L+C ED+   +             P    ESIA F+E E    P
Sbjct: 1    MSVSCSNCFPDDDHSFLLCGEDSSGIMDSSPECSSDLDSSPPSEAESIAGFMEDERNFVP 60

Query: 312  LEFDYMARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQAN 491
              F+Y+ RFQS+SLD SAR++SV+WILKVQA++ FQP+TAYL+VNY+DRFL  R LP   
Sbjct: 61   -GFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPLPPKT 119

Query: 492  GSWPLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRMELLVLGTLDWRLR 671
              WPLQLLSVACLSLA KMEE+LVPSLLDLQVEG K++FEP+TI RMELLVLG LDWRLR
Sbjct: 120  NGWPLQLLSVACLSLAAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLR 179

Query: 672  SITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISFLDYSPSSIAVASLLHAAN 851
            S+TPF+F+DFFA K+DSTGT  GFL+SRAT+II+  I+E SFL Y PS IA A++LHAAN
Sbjct: 180  SVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAAN 239

Query: 852  EFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQRKPPKVLPQLRV 1010
            E PN S + P +A +WC GL K++I+ CYQLMQE+V+   QRKPPKVLPQLRV
Sbjct: 240  EIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRV 292


>ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  340 bits (873), Expect = 5e-91
 Identities = 176/288 (61%), Positives = 218/288 (75%), Gaps = 1/288 (0%)
 Frame = +3

Query: 150  MSLSCSDCFSDLICSEDAR-TLXXXXXXXXXXXXXPDGIEESIAEFVEGEGTHEPLEFDY 326
            MS+S S+CFS+L+C ED+                 P  +EESI+ F++ E    P ++D 
Sbjct: 1    MSVSISNCFSNLLCQEDSSGVFSGESPGCSSDLESPACVEESISVFIKNERHFVP-DYDC 59

Query: 327  MARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 506
             +RFQS SLD +AR DS++WILKVQA++ FQPLTAYL+VNY+DRFL  R LPQ+NG WPL
Sbjct: 60   FSRFQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQSNG-WPL 118

Query: 507  QLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRMELLVLGTLDWRLRSITPF 686
            QLLSVACLSLA KMEE LVP+LLDLQVEG K+IFEPRTICRMELLVL  LDWRLRS+TPF
Sbjct: 119  QLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPF 178

Query: 687  TFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISFLDYSPSSIAVASLLHAANEFPNL 866
             F+ FFAYK+D +G  I FL+SRATEII+  I+E+ FL+Y PS IA A+LL AANE  +L
Sbjct: 179  NFIAFFAYKLDPSGDFIEFLISRATEIILSHIREVIFLEYWPSCIAAAALLCAANEVQSL 238

Query: 867  SFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQRKPPKVLPQLRV 1010
            S + P +A +WC GL K+ IM CY+LMQE+V+  T+RK PK+LPQ RV
Sbjct: 239  SVVNPEHAESWCNGLRKENIMGCYRLMQEIVLDNTRRKSPKILPQYRV 286


>ref|XP_004155401.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  340 bits (873), Expect = 5e-91
 Identities = 176/288 (61%), Positives = 218/288 (75%), Gaps = 1/288 (0%)
 Frame = +3

Query: 150  MSLSCSDCFSDLICSEDAR-TLXXXXXXXXXXXXXPDGIEESIAEFVEGEGTHEPLEFDY 326
            MS+S S+CFS+L+C ED+                 P  +EESI+ F++ E    P ++D 
Sbjct: 1    MSVSISNCFSNLLCQEDSSGVFSGESPGCSSDLESPACVEESISVFIKNERHFVP-DYDC 59

Query: 327  MARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 506
             +RFQS SLD +AR DS++WILKVQA++ FQPLTAYL+VNY+DRFL  R LPQ+NG WPL
Sbjct: 60   FSRFQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQSNG-WPL 118

Query: 507  QLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRMELLVLGTLDWRLRSITPF 686
            QLLSVACLSLA KMEE LVP+LLDLQVEG K+IFEPRTICRMELLVL  LDWRLRS+TPF
Sbjct: 119  QLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPF 178

Query: 687  TFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISFLDYSPSSIAVASLLHAANEFPNL 866
             F+ FFAYK+D +G  I FL+SRATEII+  I+E+ FL+Y PS IA A+LL AANE  +L
Sbjct: 179  NFIAFFAYKLDPSGDFIEFLISRATEIILSHIREVIFLEYWPSCIAAAALLCAANEVQSL 238

Query: 867  SFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQRKPPKVLPQLRV 1010
            S + P +A +WC GL K+ IM CY+LMQE+V+  T+RK PK+LPQ RV
Sbjct: 239  SVVNPEHAESWCNGLRKENIMGCYRLMQEIVLDNTRRKSPKILPQYRV 286