BLASTX nr result

ID: Coptis25_contig00011761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011761
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...   125   5e-27
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...   113   1e-23
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...   104   6e-21
ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865...   103   1e-20

>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/100 (63%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
 Frame = +3

Query: 45  KRCPPGGGNSVILYTTT-GGDREPFKDSNKVRSMLRSHYIQMFERDIFKDALSREQLKEL 221
           K+CPPGG N+V++YTTT  G R+ F+D N VRS+L SH+I MFERDI  D+  +E+L+ L
Sbjct: 246 KKCPPGGANAVVIYTTTLRGIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKEELRGL 305

Query: 222 MGY--IKVPLLFVKGRLVGGADEVSEMEENGDLDILFDGI 335
           MG   +KVPL+FVKGRL+GGADEV ++EE G LDILFDGI
Sbjct: 306 MGTKEVKVPLVFVKGRLIGGADEVVKLEEEGKLDILFDGI 345


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
 Frame = +3

Query: 45  KRCPPGGGNSVILYTTT-GGDREPFKDSNKVRSMLRSHYIQMFERDIFKDALSREQLKEL 221
           ++CPPGG N+V+LYTTT  G R+ F+D N VRS++ SH+I M ERDI  D+  +E+L+ L
Sbjct: 274 QKCPPGGENAVVLYTTTLRGIRKTFEDCNTVRSIIESHHIHMLERDISMDSGLKEELRRL 333

Query: 222 MG--YIKVPLLFVKGRLVGGADEVSEMEENGDLDILFDGI 335
           MG   +KVPL+FVKGRL+GGAD+V ++EE G L ILFDGI
Sbjct: 334 MGTKVVKVPLVFVKGRLIGGADQVVKLEEEGKLGILFDGI 373


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/100 (55%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
 Frame = +3

Query: 45  KRCPPGGGNSVILYTTT-GGDREPFKDSNKVRSMLRSHYIQMFERDIFKDALSREQLKEL 221
           ++CPPGG N V++YTTT  G R+ F+D N  RS++ SH+I + ERD+  D+  +E+L+ L
Sbjct: 254 QKCPPGGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKEELRRL 313

Query: 222 MGY--IKVPLLFVKGRLVGGADEVSEMEENGDLDILFDGI 335
           MG   +KVPL+FVKGRL+GGAD+V ++EE G L+ILFDGI
Sbjct: 314 MGTKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGI 353


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/98 (55%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
 Frame = +3

Query: 51  CPPGGGNSVILYTTT-GGDREPFKDSNKVRSMLRSHYIQMFERDIFKDALSREQLKELMG 227
           CPPGG  SV++YTTT  G R+ F+D NKVRS++ S+ I + ERD+  D+  +E+L+ LMG
Sbjct: 246 CPPGGETSVVIYTTTLRGIRKTFEDCNKVRSIVESYGIHVVERDVSMDSGFKEELRALMG 305

Query: 228 Y--IKVPLLFVKGRLVGGADEVSEMEENGDLDILFDGI 335
              +KVP +FVKGRL+GGA EV +MEE G L +LF+GI
Sbjct: 306 SKEVKVPAVFVKGRLIGGAAEVLKMEEEGKLGVLFEGI 343


>ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 398

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/100 (50%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = +3

Query: 45  KRCPPGGGNSVILYTTT-GGDREPFKDSNKVRSMLRSHYIQMFERDIFKDALSREQLKEL 221
           ++ PPGG N V++YTTT  G R+ F++ NKVRS++ S+ + + ERD+  D+  +E+L++L
Sbjct: 245 EKLPPGGENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVLERDVSMDSRFKEELRKL 304

Query: 222 MG--YIKVPLLFVKGRLVGGADEVSEMEENGDLDILFDGI 335
           MG   +KVP++FVKGR VGGA+EV ++EE G L +LF+GI
Sbjct: 305 MGTEQVKVPVVFVKGRFVGGAEEVVKLEEEGKLGVLFEGI 344


Top